Primates in biodefense research: Data and analysis
This repository contains data and script to repeat the reported analysis. It contains the following:
report.txtRaw data files downloaded from the USDA's Animal Care Information System database on May 13, 2015.
report.jsonFiles to process/clean the data above using Open Refine. Load each
.txtfile as a new project, select the
Undo/Redotab, click the
Applybutton and then paste the content of the corresponding
.jsonfile into the
Apply Operation Historybox. Click
Perform Operationsand the data will be processed to edit field headings, and ensure that entries for primates are labelled consistently as
NONHUMAN PRIMATESin the field
col_a. Then export the data from each project as a tab-separated text file.
report.tsvProcessed/cleaned versions of the data, exported from Open Refine.
primates.rR script to repeat the analysis reported in the article, using the processed/cleaned data. The script will generate a static version of the published interactive chart.