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On Mac Udunits fails because of flex not found #733

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potter2 opened this Issue Oct 3, 2014 · 48 comments

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@potter2

potter2 commented Oct 3, 2014

Something isn't working now I can't compile. Anybody else having this problem?


CONFIGURE_ARGS IS

configure: error: cannot find output from flex; giving up

Config Errors detected:

CMake Error at
/Users/potter/uvcdat/build/CMake/cdat_configure_step.cmake:15 (message):

Error in config

make[2]: *** [udunits2-prefix/src/udunits2-stamp/udunits2-configure] Error 1
make[1]: *** [CMakeFiles/udunits2.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
-- png configur

@williams13

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williams13 commented Oct 3, 2014

I didn't try yet. I am waiting for Aashish to give the all clear.

From: potter2 <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Thursday, October 2, 2014 8:28 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: [uvcdat] make failed (#733)

Something isn't working now I can't compile. Anybody else having this problem?


CONFIGURE_ARGS IS

configure: error: cannot find output from flex; giving up

Config Errors detected:

CMake Error at
/Users/potter/uvcdat/build/CMake/cdat_configure_step.cmake:15 (message):

Error in config


make[2]: *** [udunits2-prefix/src/udunits2-stamp/udunits2-configure] Error 1
make[1]: *** [CMakeFiles/udunits2.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
-- png configur


Reply to this email directly or view it on GitHubhttps://github.com//issues/733.

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aashish24 commented Oct 3, 2014

Looks like you are running into flex error issue.

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aashish24 commented Oct 3, 2014

@doutriaux1 Does CMOR really needs UDUNITS? Why not we use cdtime? Just curious

@aashish24 aashish24 changed the title from make failed to On Mac Udunits fails because of flex not found Oct 3, 2014

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aashish24 commented Oct 3, 2014

@doutriaux1 Also, how did you install flex on your system

@potter2

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potter2 commented Oct 3, 2014

Yes, CMOR needs UDUNITS, I would say if this is holding up progress we droop it. CMOR could be added later. I thought it was a no brainer to add CMOR back in, but maybe not.
Right now UVCDAT won’t build.

Dean?

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Aashish Chaudhary <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 6:20 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] make failed (#733)

@doutriaux1https://github.com/doutriaux1 Does CMOR really needs UDUNITS? Why not we use cdtime? Just curious


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57795209.

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aashish24 commented Oct 3, 2014

CMOR is fine, but its just that its using udunits (and not cdtime), not sure why (may be historical reasons). The issue you have posted, I have realized on the travis dashboard as well. I don't know enough about flex at the moment but can look into it afterwards.

@potter2

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potter2 commented Oct 3, 2014

As I understand it, UDUNITS is needed for the units conversions done in CMOR. But again, CMOR is not needed for UVCDAT to work properly. I asked and I think Dean asked that it be put pack in.

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Aashish Chaudhary <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 7:16 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

CMOR is fine, but its just that its using udunits (and not cdtime), not sure why (may be historical reasons). The issue you have posted, I have realized on the travis dashboard as well. I don't know enough about flex at the moment but can look into it afterwards.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57801705.

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williams13 commented Oct 3, 2014

Yes, it needs to say. It is not a problem and not big. Aashish was just asking a question. The holdup for the release are the many bugs in UV-CDAT. We have been working on the vector and animation bugs for a long time and as we continue to use UV-CDAT, more bugs coming up and being squashed.

-Dean

From: potter2 <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 7:23 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

As I understand it, UDUNITS is needed for the units conversions done in CMOR. But again, CMOR is not needed for UVCDAT to work properly. I asked and I think Dean asked that it be put pack in.

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Aashish Chaudhary <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 7:16 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

CMOR is fine, but its just that its using udunits (and not cdtime), not sure why (may be historical reasons). The issue you have posted, I have realized on the travis dashboard as well. I don't know enough about flex at the moment but can look into it afterwards.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57801705.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57802586.

@potter2

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potter2 commented Oct 3, 2014

Dean,
It is holding up the build. There is some problem with flex (related to udunits). It won’t build for me right now..

Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 8:28 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Yes, it needs to say. It is not a problem and not big. Aashish was just asking a question. The holdup for the release are the many bugs in UV-CDAT. We have been working on the vector and animation bugs for a long time and as we continue to use UV-CDAT, more bugs coming up and being squashed.

-Dean

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 7:23 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

As I understand it, UDUNITS is needed for the units conversions done in CMOR. But again, CMOR is not needed for UVCDAT to work properly. I asked and I think Dean asked that it be put pack in.

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Aashish Chaudhary <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 7:16 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

CMOR is fine, but its just that its using udunits (and not cdtime), not sure why (may be historical reasons). The issue you have posted, I have realized on the travis dashboard as well. I don't know enough about flex at the moment but can look into it afterwards.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57801705.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57802586.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57811713.

@williams13

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williams13 commented Oct 3, 2014

:-( Sad… Thanks for the clarification.

From: potter2 <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 8:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Dean,
It is holding up the build. There is some problem with flex (related to udunits). It won’t build for me right now..

Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 8:28 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Yes, it needs to say. It is not a problem and not big. Aashish was just asking a question. The holdup for the release are the many bugs in UV-CDAT. We have been working on the vector and animation bugs for a long time and as we continue to use UV-CDAT, more bugs coming up and being squashed.

-Dean

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 7:23 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

As I understand it, UDUNITS is needed for the units conversions done in CMOR. But again, CMOR is not needed for UVCDAT to work properly. I asked and I think Dean asked that it be put pack in.

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Aashish Chaudhary <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 7:16 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

CMOR is fine, but its just that its using udunits (and not cdtime), not sure why (may be historical reasons). The issue you have posted, I have realized on the travis dashboard as well. I don't know enough about flex at the moment but can look into it afterwards.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57801705.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57802586.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57811713.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57812242.

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doutriaux1 commented Oct 3, 2014

Cmor RELLY does need it BUT it is now part of netcdf we could try to switch the build of udunits as part of netcdf. Also genutil needs it. It is a VERY VERY VERY important library. I’m guessing Jeff is also using it in some way in the diagnostics (the lcmdi-metrics project is using it)

C.

From: Aashish Chaudhary <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 6:20 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] make failed (#733)

@doutriaux1https://github.com/doutriaux1 Does CMOR really needs UDUNITS? Why not we use cdtime? Just curious


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57795209.

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doutriaux1 commented Oct 3, 2014

nope it is whatever came with my mac. but i beleive homebrew installs a new one.

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doutriaux1 commented Oct 3, 2014

@aashish24 cditme only deals with time dimensions, cmor is actually the c code of cdtime for time units. udunits deals with ANY units length/volume/pressure, etc....

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doutriaux1 commented Oct 3, 2014

@aashish24 please try to turn off udunits build and enable it from netcdf this might help.

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potter2 commented Oct 3, 2014

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57820125.

@williams13

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williams13 commented Oct 3, 2014

We are waiting for David L. and Charles to give the okay to rebuild.

How close are we? I know that Jeff gave the okay on the vectors.

-Dean

From: potter2 <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 2:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57820125.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57866108.

@doutriaux1

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doutriaux1 commented Oct 3, 2014

Dean,

Just merged the vectors fix, go ahead on your end. But nothing as been done for the flex. Jerry, will try my suggestion now and will ask you test a branch ok?

C.

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 2:40 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

We are waiting for David L. and Charles to give the okay to rebuild.

How close are we? I know that Jeff gave the okay on the vectors.

-Dean

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 2:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57820125.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57866108.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57866841.

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williams13 commented Oct 3, 2014

Okay, thanks! I will rebuild now! :-)

From: Charles <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 2:47 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Dean,

Just merged the vectors fix, go ahead on your end. But nothing as been done for the flex. Jerry, will try my suggestion now and will ask you test a branch ok?

C.

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 2:40 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

We are waiting for David L. and Charles to give the okay to rebuild.

How close are we? I know that Jeff gave the okay on the vectors.

-Dean

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 2:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57820125.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57866108.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57866841.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57867460.

@potter2

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potter2 commented Oct 3, 2014

I don’t get what I am supposed to do. I can’t fix the flex issue - can I?

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 2:47 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Dean,

Just merged the vectors fix, go ahead on your end. But nothing as been done for the flex. Jerry, will try my suggestion now and will ask you test a branch ok?

C.

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 2:40 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

We are waiting for David L. and Charles to give the okay to rebuild.

How close are we? I know that Jeff gave the okay on the vectors.

-Dean

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 2:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57820125.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57866108.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57866841.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57867460.

@ThomasMaxwell

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ThomasMaxwell commented Oct 3, 2014

This appears to be an OSX 10.9 issue as I am able to build master without problem on 10.8.5.

From: potter2 <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57820125.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57866108.

@williams13

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Contributor

williams13 commented Oct 3, 2014

Just built the UV-CDAT from master. I am getting old vtk errors that were cleared up a while back. Did everything get into master?!

[naomi 6] ~/work > uvcdat
UVCDAT setup already sourced for this install location.
2014-10-03 15:41:14.995 Python[26228:f07] invalid drawable
2014-10-03 15:41:15.007 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

2014-10-03 15:41:15.031 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

From: Thomas Maxwell <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:04 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

This appears to be an OSX 10.9 issue as I am able to build master without problem on 10.8.5.

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57820125.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57866108.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57869539.

@doutriaux1

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doutriaux1 commented Oct 3, 2014

What are you running? Vectors?

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 3:43 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just built the UV-CDAT from master. I am getting old vtk errors that were cleared up a while back. Did everything get into master?!

[naomi 6] ~/work > uvcdat
UVCDAT setup already sourced for this install location.
2014-10-03 15:41:14.995 Python[26228:f07] invalid drawable
2014-10-03 15:41:15.007 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

2014-10-03 15:41:15.031 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

From: Thomas Maxwell <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:04 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

This appears to be an OSX 10.9 issue as I am able to build master without problem on 10.8.5.

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57820125.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57866108.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57869539.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57872512.

@williams13

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Contributor

williams13 commented Oct 3, 2014

I just typed in uvcdat at the prompt and plotted box fill in the GUI.

From: Charles <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:58 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

What are you running? Vectors?

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 3:43 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just built the UV-CDAT from master. I am getting old vtk errors that were cleared up a while back. Did everything get into master?!

[naomi 6] ~/work > uvcdat
UVCDAT setup already sourced for this install location.
2014-10-03 15:41:14.995 Python[26228:f07] invalid drawable
2014-10-03 15:41:15.007 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

2014-10-03 15:41:15.031 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

From: Thomas Maxwell <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:04 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

This appears to be an OSX 10.9 issue as I am able to build master without problem on 10.8.5.

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57820125.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57866108.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57869539.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57872512.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57875340.

@doutriaux1

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doutriaux1 commented Oct 3, 2014

Yes I can confirm I see them too from the GUI.
@dlonie @aashish did the VTK repo got updated and put back something in?

C.

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 4:00 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

I just typed in uvcdat at the prompt and plotted box fill in the GUI.

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:58 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

What are you running? Vectors?

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 3:43 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just built the UV-CDAT from master. I am getting old vtk errors that were cleared up a while back. Did everything get into master?!

[naomi 6] ~/work > uvcdat
UVCDAT setup already sourced for this install location.
2014-10-03 15:41:14.995 Python[26228:f07] invalid drawable
2014-10-03 15:41:15.007 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

2014-10-03 15:41:15.031 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

From: Thomas Maxwell <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:04 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

This appears to be an OSX 10.9 issue as I am able to build master without problem on 10.8.5.

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57820125.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57866108.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57869539.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57872512.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57875340.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57875746.

@williams13

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williams13 commented Oct 3, 2014

Just making a note that this may be another example that bug fixes are not getting in (and/or remaining in) the master repository.

Running CTEST –j4 –D Experimental now…

From: Charles <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 4:20 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Yes I can confirm I see them too from the GUI.
@dlonie @aashish did the VTK repo got updated and put back something in?

C.

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 4:00 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

I just typed in uvcdat at the prompt and plotted box fill in the GUI.

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:58 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

What are you running? Vectors?

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 3:43 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just built the UV-CDAT from master. I am getting old vtk errors that were cleared up a while back. Did everything get into master?!

[naomi 6] ~/work > uvcdat
UVCDAT setup already sourced for this install location.
2014-10-03 15:41:14.995 Python[26228:f07] invalid drawable
2014-10-03 15:41:15.007 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

2014-10-03 15:41:15.031 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

From: Thomas Maxwell <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:04 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

This appears to be an OSX 10.9 issue as I am able to build master without problem on 10.8.5.

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57820125.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57866108.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57869539.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57872512.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57875340.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57875746.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57879224.

@williams13

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Contributor

williams13 commented Oct 3, 2014

Just finished completing the CTEST: http://open.cdash.org/index.php?project=UV-CDAT&display=project

4 test persists:

99% tests passed, 4 tests failed out of 319

Total Test time (real) = 557.84 sec

The following tests FAILED:
3 - cdms_verify (Failed)
4 - cdms_load_and_plot_axis_variable (Failed)
5 - run_uvcdat_gui_tests (Failed)
313 - CDMS_Test_multiple_formats (Failed)
Performing coverage

Where are we on removing these failures?

From: , Dean Williams <williams13@llnl.govmailto:williams13@llnl.gov>
Date: Friday, October 3, 2014 4:24 PM
To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>, UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just making a note that this may be another example that bug fixes are not getting in (and/or remaining in) the master repository.

Running CTEST –j4 –D Experimental now…

From: Charles <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 4:20 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Yes I can confirm I see them too from the GUI.
@dlonie @aashish did the VTK repo got updated and put back something in?

C.

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 4:00 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

I just typed in uvcdat at the prompt and plotted box fill in the GUI.

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:58 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

What are you running? Vectors?

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 3:43 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just built the UV-CDAT from master. I am getting old vtk errors that were cleared up a while back. Did everything get into master?!

[naomi 6] ~/work > uvcdat
UVCDAT setup already sourced for this install location.
2014-10-03 15:41:14.995 Python[26228:f07] invalid drawable
2014-10-03 15:41:15.007 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

2014-10-03 15:41:15.031 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

From: Thomas Maxwell <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:04 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

This appears to be an OSX 10.9 issue as I am able to build master without problem on 10.8.5.

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57820125.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57866108.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57869539.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57872512.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57875340.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57875746.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57879224.

@potter2

This comment has been minimized.

potter2 commented Oct 4, 2014

What mac os are you using?

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 4:32 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just finished completing the CTEST: http://open.cdash.org/index.php?project=UV-CDAT&display=project

4 test persists:

99% tests passed, 4 tests failed out of 319

Total Test time (real) = 557.84 sec

The following tests FAILED:
3 - cdms_verify (Failed)
4 - cdms_load_and_plot_axis_variable (Failed)
5 - run_uvcdat_gui_tests (Failed)
313 - CDMS_Test_multiple_formats (Failed)
Performing coverage

Where are we on removing these failures?

From: , Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Date: Friday, October 3, 2014 4:24 PM
To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>, UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just making a note that this may be another example that bug fixes are not getting in (and/or remaining in) the master repository.

Running CTEST –j4 –D Experimental now…

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 4:20 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Yes I can confirm I see them too from the GUI.
@dlonie @aashish did the VTK repo got updated and put back something in?

C.

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 4:00 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

I just typed in uvcdat at the prompt and plotted box fill in the GUI.

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:58 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

What are you running? Vectors?

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 3:43 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just built the UV-CDAT from master. I am getting old vtk errors that were cleared up a while back. Did everything get into master?!

[naomi 6] ~/work > uvcdat
UVCDAT setup already sourced for this install location.
2014-10-03 15:41:14.995 Python[26228:f07] invalid drawable
2014-10-03 15:41:15.007 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

2014-10-03 15:41:15.031 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

From: Thomas Maxwell <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:04 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

This appears to be an OSX 10.9 issue as I am able to build master without problem on 10.8.5.

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57820125.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57866108.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57869539.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57872512.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57875340.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57875746.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57879224.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57880908.

@williams13

This comment has been minimized.

Contributor

williams13 commented Oct 4, 2014

10.8.5

From: potter2 <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:06 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

What mac os are you using?

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 4:32 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just finished completing the CTEST: http://open.cdash.org/index.php?project=UV-CDAT&display=project

4 test persists:

99% tests passed, 4 tests failed out of 319

Total Test time (real) = 557.84 sec

The following tests FAILED:
3 - cdms_verify (Failed)
4 - cdms_load_and_plot_axis_variable (Failed)
5 - run_uvcdat_gui_tests (Failed)
313 - CDMS_Test_multiple_formats (Failed)
Performing coverage

Where are we on removing these failures?

From: , Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Date: Friday, October 3, 2014 4:24 PM
To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>, UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just making a note that this may be another example that bug fixes are not getting in (and/or remaining in) the master repository.

Running CTEST –j4 –D Experimental now…

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 4:20 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Yes I can confirm I see them too from the GUI.
@dlonie @aashish did the VTK repo got updated and put back something in?

C.

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 4:00 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

I just typed in uvcdat at the prompt and plotted box fill in the GUI.

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:58 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

What are you running? Vectors?

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 3:43 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just built the UV-CDAT from master. I am getting old vtk errors that were cleared up a while back. Did everything get into master?!

[naomi 6] ~/work > uvcdat
UVCDAT setup already sourced for this install location.
2014-10-03 15:41:14.995 Python[26228:f07] invalid drawable
2014-10-03 15:41:15.007 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

2014-10-03 15:41:15.031 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

From: Thomas Maxwell <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:04 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

This appears to be an OSX 10.9 issue as I am able to build master without problem on 10.8.5.

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
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Date: Friday, October 3, 2014 5:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57820125.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57866108.


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@doutriaux1

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doutriaux1 commented Oct 4, 2014

I’m on 10.9 and I see the warnings as well

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 5:26 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

10.8.5

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:06 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

What mac os are you using?

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 4:32 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just finished completing the CTEST: http://open.cdash.org/index.php?project=UV-CDAT&display=project

4 test persists:

99% tests passed, 4 tests failed out of 319

Total Test time (real) = 557.84 sec

The following tests FAILED:
3 - cdms_verify (Failed)
4 - cdms_load_and_plot_axis_variable (Failed)
5 - run_uvcdat_gui_tests (Failed)
313 - CDMS_Test_multiple_formats (Failed)
Performing coverage

Where are we on removing these failures?

From: , Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Date: Friday, October 3, 2014 4:24 PM
To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>, UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just making a note that this may be another example that bug fixes are not getting in (and/or remaining in) the master repository.

Running CTEST –j4 –D Experimental now…

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 4:20 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Yes I can confirm I see them too from the GUI.
@dlonie @aashish did the VTK repo got updated and put back something in?

C.

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 4:00 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

I just typed in uvcdat at the prompt and plotted box fill in the GUI.

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:58 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

What are you running? Vectors?

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
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Date: Friday, October 3, 2014 at 3:43 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just built the UV-CDAT from master. I am getting old vtk errors that were cleared up a while back. Did everything get into master?!

[naomi 6] ~/work > uvcdat
UVCDAT setup already sourced for this install location.
2014-10-03 15:41:14.995 Python[26228:f07] invalid drawable
2014-10-03 15:41:15.007 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

2014-10-03 15:41:15.031 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

From: Thomas Maxwell <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:04 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

This appears to be an OSX 10.9 issue as I am able to build master without problem on 10.8.5.

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57820125.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57866108.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57869539.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57872512.


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@potter2

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potter2 commented Oct 4, 2014

I found the problem. I used cmake instead of ccmake and it built fine.. The flex issue went away.. I thought cmake and ccmake were exactly the same except for the interface.

Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 5:26 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

10.8.5

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:06 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

What mac os are you using?

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 4:32 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just finished completing the CTEST: http://open.cdash.org/index.php?project=UV-CDAT&display=project

4 test persists:

99% tests passed, 4 tests failed out of 319

Total Test time (real) = 557.84 sec

The following tests FAILED:
3 - cdms_verify (Failed)
4 - cdms_load_and_plot_axis_variable (Failed)
5 - run_uvcdat_gui_tests (Failed)
313 - CDMS_Test_multiple_formats (Failed)
Performing coverage

Where are we on removing these failures?

From: , Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Date: Friday, October 3, 2014 4:24 PM
To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>, UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just making a note that this may be another example that bug fixes are not getting in (and/or remaining in) the master repository.

Running CTEST –j4 –D Experimental now…

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 4:20 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Yes I can confirm I see them too from the GUI.
@dlonie @aashish did the VTK repo got updated and put back something in?

C.

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 4:00 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

I just typed in uvcdat at the prompt and plotted box fill in the GUI.

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:58 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

What are you running? Vectors?

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 3:43 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just built the UV-CDAT from master. I am getting old vtk errors that were cleared up a while back. Did everything get into master?!

[naomi 6] ~/work > uvcdat
UVCDAT setup already sourced for this install location.
2014-10-03 15:41:14.995 Python[26228:f07] invalid drawable
2014-10-03 15:41:15.007 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

2014-10-03 15:41:15.031 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

From: Thomas Maxwell <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:04 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

This appears to be an OSX 10.9 issue as I am able to build master without problem on 10.8.5.

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


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@doutriaux1

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doutriaux1 commented Oct 4, 2014

Thanks Jerry, that is good to know @aashish24 is it a possible cmake bug?

From: potter2 <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 5:58 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

I found the problem. I used cmake instead of ccmake and it built fine.. The flex issue went away.. I thought cmake and ccmake were exactly the same except for the interface.

Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 5:26 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

10.8.5

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:06 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

What mac os are you using?

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 4:32 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just finished completing the CTEST: http://open.cdash.org/index.php?project=UV-CDAT&display=project

4 test persists:

99% tests passed, 4 tests failed out of 319

Total Test time (real) = 557.84 sec

The following tests FAILED:
3 - cdms_verify (Failed)
4 - cdms_load_and_plot_axis_variable (Failed)
5 - run_uvcdat_gui_tests (Failed)
313 - CDMS_Test_multiple_formats (Failed)
Performing coverage

Where are we on removing these failures?

From: , Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Date: Friday, October 3, 2014 4:24 PM
To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>, UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just making a note that this may be another example that bug fixes are not getting in (and/or remaining in) the master repository.

Running CTEST –j4 –D Experimental now…

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 4:20 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Yes I can confirm I see them too from the GUI.
@dlonie @aashish did the VTK repo got updated and put back something in?

C.

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 4:00 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

I just typed in uvcdat at the prompt and plotted box fill in the GUI.

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:58 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

What are you running? Vectors?

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 3:43 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just built the UV-CDAT from master. I am getting old vtk errors that were cleared up a while back. Did everything get into master?!

[naomi 6] ~/work > uvcdat
UVCDAT setup already sourced for this install location.
2014-10-03 15:41:14.995 Python[26228:f07] invalid drawable
2014-10-03 15:41:15.007 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

2014-10-03 15:41:15.031 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

From: Thomas Maxwell <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:04 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

This appears to be an OSX 10.9 issue as I am able to build master without problem on 10.8.5.

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-57820125.


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@williams13

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williams13 commented Oct 4, 2014

I use cmake, but you have to run it twice.

From: potter2 <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:58 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

I found the problem. I used cmake instead of ccmake and it built fine.. The flex issue went away.. I thought cmake and ccmake were exactly the same except for the interface.

Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 5:26 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

10.8.5

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:06 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

What mac os are you using?

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 4:32 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just finished completing the CTEST: http://open.cdash.org/index.php?project=UV-CDAT&display=project

4 test persists:

99% tests passed, 4 tests failed out of 319

Total Test time (real) = 557.84 sec

The following tests FAILED:
3 - cdms_verify (Failed)
4 - cdms_load_and_plot_axis_variable (Failed)
5 - run_uvcdat_gui_tests (Failed)
313 - CDMS_Test_multiple_formats (Failed)
Performing coverage

Where are we on removing these failures?

From: , Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Date: Friday, October 3, 2014 4:24 PM
To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>, UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just making a note that this may be another example that bug fixes are not getting in (and/or remaining in) the master repository.

Running CTEST –j4 –D Experimental now…

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 4:20 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Yes I can confirm I see them too from the GUI.
@dlonie @aashish did the VTK repo got updated and put back something in?

C.

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
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Date: Friday, October 3, 2014 at 4:00 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

I just typed in uvcdat at the prompt and plotted box fill in the GUI.

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:58 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

What are you running? Vectors?

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 3:43 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just built the UV-CDAT from master. I am getting old vtk errors that were cleared up a while back. Did everything get into master?!

[naomi 6] ~/work > uvcdat
UVCDAT setup already sourced for this install location.
2014-10-03 15:41:14.995 Python[26228:f07] invalid drawable
2014-10-03 15:41:15.007 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

2014-10-03 15:41:15.031 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

From: Thomas Maxwell <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:04 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

This appears to be an OSX 10.9 issue as I am able to build master without problem on 10.8.5.

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
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Date: Friday, October 3, 2014 5:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
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Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


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potter2 commented Oct 4, 2014

Actually you need to configure at least 3 time in ccmake

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 6:00 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

I use cmake, but you have to run it twice.

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:58 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

I found the problem. I used cmake instead of ccmake and it built fine.. The flex issue went away.. I thought cmake and ccmake were exactly the same except for the interface.

Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 5:26 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

10.8.5

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:06 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

What mac os are you using?

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 4:32 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just finished completing the CTEST: http://open.cdash.org/index.php?project=UV-CDAT&display=project

4 test persists:

99% tests passed, 4 tests failed out of 319

Total Test time (real) = 557.84 sec

The following tests FAILED:
3 - cdms_verify (Failed)
4 - cdms_load_and_plot_axis_variable (Failed)
5 - run_uvcdat_gui_tests (Failed)
313 - CDMS_Test_multiple_formats (Failed)
Performing coverage

Where are we on removing these failures?

From: , Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Date: Friday, October 3, 2014 4:24 PM
To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>, UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just making a note that this may be another example that bug fixes are not getting in (and/or remaining in) the master repository.

Running CTEST –j4 –D Experimental now…

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
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Date: Friday, October 3, 2014 4:20 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Yes I can confirm I see them too from the GUI.
@dlonie @aashish did the VTK repo got updated and put back something in?

C.

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
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Date: Friday, October 3, 2014 at 4:00 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

I just typed in uvcdat at the prompt and plotted box fill in the GUI.

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
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Date: Friday, October 3, 2014 3:58 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

What are you running? Vectors?

From: "Dean N. Williams" <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
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Date: Friday, October 3, 2014 at 3:43 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: "Doutriaux, Charles" <doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.govmailto:doutriaux1@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Just built the UV-CDAT from master. I am getting old vtk errors that were cleared up a while back. Did everything get into master?!

[naomi 6] ~/work > uvcdat
UVCDAT setup already sourced for this install location.
2014-10-03 15:41:14.995 Python[26228:f07] invalid drawable
2014-10-03 15:41:15.007 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

2014-10-03 15:41:15.031 Python[26228:f07] invalid drawable
ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a3df70): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx, line 1202
vtkOpenGLRenderer (0x7f85a5a4dd60): failed after Clear 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

ERROR: In /Users/williams13/work/uvcdatb/build_uvcdat/build/VTK/Rendering/OpenGL/vtkOpenGLImageSliceMapper.cxx, line 574
vtkOpenGLImageSliceMapper (0x7f85a5a4be10): failed after RenderPolygon 1 OpenGL errors detected
0 : (1286) Invalid framebuffer operation

From: Thomas Maxwell <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 3:04 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

This appears to be an OSX 10.9 issue as I am able to build master without problem on 10.8.5.

From: potter2 <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 5:33 PM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Aashish,
This is still broken. Have you tried Charles’ suggestion?

Thanks,
Jerry

Gerald (Jerry) Potter
NASA Goddard Space Flight Center
E-mail gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov
Office 28:S241
Phone 707.315.8314
Analysis and Data Consultant
Department GSFC:606.2

From: Charles <notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.commailto:reply@reply.github.com>
Date: Friday, October 3, 2014 at 9:32 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Gerald Potter <gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.govmailto:gerald.potter@nasa.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

@aashish24https://github.com/aashish24 please try to turn off udunits build and enable it from netcdf this might help.


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doutriaux1 commented Oct 4, 2014

@potter2 I have a new branch with the newest udunits2 this might help.
@aashish24 @dlonie : @potter2 says it works with cmake, could it be a cmake bug?

@potter2 potter2 closed this Oct 6, 2014

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aashish24 commented Oct 6, 2014

@aashish24 aashish24 reopened this Oct 6, 2014

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williams13 commented Oct 6, 2014

This is not a high priority. We need to focus on getting UV-CDAT out.

From: Aashish Chaudhary <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Monday, October 6, 2014 5:52 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

Reopened #733#733.


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aashish24 commented Oct 6, 2014

Sure. But keeping the issue open so that we won't forget about it.

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aashish24 commented Oct 6, 2014

All just wanted to clarify few things:

-- ccmake is just the GUI for cmake.
-- udunits is failing constantly on the dashboards (travis CI for Mac)
-- We cannot loose any changes unless someone (who didn't run the setup script) force update the repository (but when others will get an error). In a pull based workflow its very very hard to override changes. github won't allow for it and our hooks prevents it.

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williams13 commented Oct 6, 2014

Let's see if udunits is used for the diagnostics. If it isn't then let's remove it and CMOR… We have got to get UV-CDAT out!!!

From: Aashish Chaudhary <notifications@github.commailto:notifications@github.com>
Reply-To: UV-CDAT/uvcdat <reply@reply.github.commailto:reply@reply.github.com>
Date: Monday, October 6, 2014 6:03 AM
To: UV-CDAT/uvcdat <uvcdat@noreply.github.commailto:uvcdat@noreply.github.com>
Cc: Dean Williams <williams13@llnl.govmailto:williams13@llnl.gov>
Subject: Re: [uvcdat] On Mac Udunits fails because of flex not found (#733)

All just wanted to clarify few things:

ccmake is just the GUI for cmake.
udunits is failing constantly on the dashboards (travis CI for Mac)
We cannot loose any changes unless someone (who didn't run the setup script) force update the repository (but when others will get an error). In a pull based workflow its very very hard to override changes. github won't allow for it and our hooks prevents it.


Reply to this email directly or view it on GitHubhttps://github.com//issues/733#issuecomment-58013485.

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doutriaux1 commented Oct 6, 2014

CDAT needs udunits.

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aashish24 commented Oct 6, 2014

@doutriaux1 so CDAT uses both udunits and cdtime? I guess in that case it is hard-dependency of CDAT

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doutriaux1 commented Oct 6, 2014

yes it is again udunits handles ANY dimensions, cdtime handles (better but only) time dimensions.

@aashish24 aashish24 added this to the 2.1 milestone Oct 6, 2014

@aashish24 aashish24 added the Build label Oct 6, 2014

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allisonvacanti commented Oct 6, 2014

I haven't seen a complete error log outside of travis, so this might be a different issue than what others are seeing, but the culprit is udunits' configure script and the flex output.

The configure script is attempting to run flex on a sample file to determine the output filename. After running flex, it does:

if test -f lex.yy.c; then
  ac_cv_prog_lex_root=lex.yy
elif test -f lexyy.c; then
  ac_cv_prog_lex_root=lexyy
else
  { { $as_echo "$as_me:$LINENO: error: cannot find output from $LEX; giving up" >&5
$as_echo "$as_me: error: cannot find output from $LEX; giving up" >&2;}
   { (exit 1); exit 1; }; }
fi

Since it can't find lex.yy.c or lexyy.c, it bails out with an error. Without having access to the travis environment it's hard to know any more. Updating the udunits version sounds like the best route forward in case they've fixed this (I notice they're up to 2.2.17, we're running 2.1.24).

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allisonvacanti commented Oct 6, 2014

Is the OpenGL issue related to this thread? The issue on github (#733) is getting difficult to follow...

It also seems odd that cmake vs ccmake would make any difference, since the error is in an autoconf configure file of a subproject. Are you certain that cmake/ccmake were run in the same environment with the same cache parameters?

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aashish24 commented Oct 6, 2014

new udunits is suffering from the same issue:

#742

Does it really need flex? Can we disable this test (update this file as post-download process?) for now

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doutriaux1 commented Oct 6, 2014

@aashish24 that sounds reasonable, maybe only disabling for Mac where we know we have flex anyway.

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doutriaux1 commented Oct 15, 2014

@dlonie that is fixed correct? please reopen if not.

@doutriaux1 doutriaux1 closed this Oct 15, 2014

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allisonvacanti commented Oct 15, 2014

It is. I patched the configure script for udunits2 to remove the check for the flex output file on mac, since the project doesn't use it anyway.

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