CMOR doesn't build

[remram44]

Somehow the configure script for CMOR tries to get the version from Git, which prints:

fatal: Not a git repository (or any of the parent directories): .git

It also uses ls flags that are not available on OS X:

ls -x --width=10000 include/cdTime/*.h include/cdTime/cdunifpp/*.h
ls: illegal option -- -
usage: ls [-ABCFGHLOPRSTUWabcdefghiklmnopqrstuwx1] [file ...]

Then the configure script eventually fails with:

checking for uuid_create in -luuid... no
configure: error: Could not get a working uuid

although libuuid has been built and --with-uuid=.../install/Externals is passed to the script.

[remram44]

Error for uuid (from config.log):

configure:4035: checking for uuid_create in -luuid
configure:4060: gcc -o conftest -g -O2   -lm  conftest.c -luuid   -I/Users/remirampin/Documents/programming/uvcdat/build-1b24f4ab/install/Externals/include  -L/Users/remirampin/Documents/programming/uvcdat/build-1b24f4ab/install/Externals/lib  -R/Users/remirampin/Documents/programming/uvcdat/build-1b24f4ab/install/Externals/lib -luuid    >&5
clang: error: unknown argument: '-R/Users/remirampin/Documents/programming/uvcdat/build-1b24f4ab/install/Externals/lib'
configure:4060: $? = 1

It doesn't look like any of this is portable to OS X.

[williams13]

I would like to try this from cmake.

Also the CDASH is not reporting tests.

[doutriaux1]

@remram44 did you manually turned ON CMOR? Yes CMOR doesn't work on Mac. I need to update the linkage since it moved to clang. So the question is did you turn ON CMOR manually or not? If post a patch ot enable CMOR on non apple for now.

[williams13]

Is there a note somewhere that states that CMOR doesn't work on Mac? We should post this on the installation. I will try to rebuild without CMOR, but I will try to build with Matplotlib.

[aashish24]

CMOR and Matplotlib (as designed) are not turned ON in default build.

[williams13]

If is issue the command:

cmake –j4 CDATBUILDMODE=ALL

Will this turn on everything, except CMOR (since we know that CMOR doesn't work on Mac)?

[aashish24]

Yes, CMOR should not be built even when you have CDAT_BUILD_MODE=ALL

[williams13]

cmake -j4 ../uvcdat -CDATBUILDMODE=ALL

Doesn't work in any case.

loading initial cache file DATBUILDMODE=ALL
CMake Error: Error processing file: DATBUILDMODE=ALL

If this doesn't work, then we should note this and CMOR options won't work for this release.

[remram44]

The issue is that the option is there, I check it, reconfigure and it goes away...

[williams13]

Hi Remi,

Are you building on a Mac? Charles states that there is a Clang problems for the Mac.

[remram44]

Options disappearing can only be CMakeLists issues...

Looking at these, I see worrying things like this: 9b35295. The cdat_build_internal_* variables have been completely disabled!?

[aashish24]

Okay.. I will have a look at it but I believe its a low priority. @doutriaux1 added cmor only for a very special purpose.

[doutriaux1]

No it doesn’t turn it on, only if you request it, and I already have a patch for this so even requesting won’t build on mac.

[doutriaux1]

fixed and in 2.0/master