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While importing cdms2 error pops up: ImportError: cannot import name 'rank' #396

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JiveshDixit opened this issue Jul 4, 2020 · 2 comments · Fixed by #387
Closed

While importing cdms2 error pops up: ImportError: cannot import name 'rank' #396

JiveshDixit opened this issue Jul 4, 2020 · 2 comments · Fixed by #387
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pending-release Fix is included in a pending release of CDAT metapackage.
Milestone
8.2.1

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@JiveshDixit
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I am using WSL Ubuntu on windows 10.
While importing a CDAT library cdms2, MV2 and vcs i am facing below mentioned error.

python3 -c "import cdms2" Traceback (most recent call last): File "<string>", line 1, in <module> File "/home/jiveslinux/miniconda3/envs/cdat81/lib/python3.6/site-packages/cdms2/__init__.py", line 32, in <module> from .dataset import createDataset, openDataset, useNetcdf3 # noqa File "/home/jiveslinux/miniconda3/envs/cdat81/lib/python3.6/site-packages/cdms2/dataset.py", line 20, in <module> from .coord import FileAxis2D, DatasetAxis2D File "/home/jiveslinux/miniconda3/envs/cdat81/lib/python3.6/site-packages/cdms2/coord.py", line 17, in <module> from .fvariable import FileVariable File "/home/jiveslinux/miniconda3/envs/cdat81/lib/python3.6/site-packages/cdms2/fvariable.py", line 7, in <module> from .variable import DatasetVariable File "/home/jiveslinux/miniconda3/envs/cdat81/lib/python3.6/site-packages/cdms2/variable.py", line 17, in <module> from .avariable import AbstractVariable File "/home/jiveslinux/miniconda3/envs/cdat81/lib/python3.6/site-packages/cdms2/avariable.py", line 1970, in <module> from . import MV2 as MV # noqa File "/home/jiveslinux/miniconda3/envs/cdat81/lib/python3.6/site-packages/cdms2/MV2.py", line 12, in <module> from numpy.ma import indices, innerproduct, masked, put, putmask, rank, ravel # noqa ImportError: cannot import name 'rank'
@muryanto1
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Hello, please pick up our unofficial release of cdat 8.2. This includes cdms2, mv2, vcs.

wget https://repo.anaconda.com/miniconda/Miniconda3-4.7.12.1-Linux-x86_64.sh -O Miniconda3-4.7.12.1-Linux-x86_64.sh
bash ./Miniconda3-4.7.12.1-Linux-x86_64.sh -b -p miniconda3
source miniconda3/etc/profile.d/conda.sh
conda activate base

conda create -n cdat82 -c cdat/label/v82 -c conda-forge "cdat=8.2" "python=3.7" "numpy=1.17" mesalib="18.3.1" jupyter notebook ipywidgets
conda activate cdat82

@jasonb5 jasonb5 added this to the 3.1.5 milestone Jul 6, 2020
@jasonb5 jasonb5 linked a pull request Jul 8, 2020 that will close this issue
replaced numpy.rank() with numpy.ndim(), adding test_setdimattribute* #387
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@jasonb5 jasonb5 added the pending-release Fix is included in a pending release of CDAT metapackage. label Jul 8, 2020
@jasonb5
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jasonb5 commented Jul 27, 2020

Closing will be included in CDMS2 3.1.5 and CDAT 8.2.1/

@jasonb5 jasonb5 closed this as completed Jul 27, 2020
@jasonb5 jasonb5 modified the milestones: 3.1.5, 8.2.1 Jul 27, 2020
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replaced numpy.rank() with numpy.ndim(), adding test_setdimattribute* CDAT/cdms
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@jasonb5 @muryanto1 @JiveshDixit