From 7ddcf4c8d2826f07446a2c26f123aaaceaee9409 Mon Sep 17 00:00:00 2001
From: martenson <1814954+martenson@users.noreply.github.com>
Date: Wed, 8 Oct 2025 07:27:31 +0000
Subject: [PATCH] Update all tools of usegalaxy.cz

---
 usegalaxy.cz/annotation.yml.lock            |  1 +
 usegalaxy.cz/assembly.yml.lock              |  1 +
 usegalaxy.cz/collection_operations.yml.lock |  1 +
 usegalaxy.cz/graph_display_data.yml.lock    |  1 +
 usegalaxy.cz/metagenomic_analysis.yml.lock  |  1 +
 usegalaxy.cz/phylogenetics.yml.lock         | 16 ++++++++++++++++
 usegalaxy.cz/variant_calling.yml.lock       |  1 +
 usegalaxy.cz/virology.yml.lock              |  4 ++++
 8 files changed, 26 insertions(+)

diff --git a/usegalaxy.cz/annotation.yml.lock b/usegalaxy.cz/annotation.yml.lock
index 7d46d42..8edffe9 100644
--- a/usegalaxy.cz/annotation.yml.lock
+++ b/usegalaxy.cz/annotation.yml.lock
@@ -36,6 +36,7 @@ tools:
   - 4e70d88adf2f
   - 94170eee0ad8
   - bb935709506a
+  - c5a90fa4b8dd
   - e5c372c91e46
   tool_panel_section_id: annotation
   tool_panel_section_label: Annotation
diff --git a/usegalaxy.cz/assembly.yml.lock b/usegalaxy.cz/assembly.yml.lock
index 244e52a..da10307 100644
--- a/usegalaxy.cz/assembly.yml.lock
+++ b/usegalaxy.cz/assembly.yml.lock
@@ -255,6 +255,7 @@ tools:
 - name: quast
   owner: iuc
   revisions:
+  - 1b1cf0c96501
   - 3061c8b029e5
   - 342a1d1fed7b
   - 59db8ea8c845
diff --git a/usegalaxy.cz/collection_operations.yml.lock b/usegalaxy.cz/collection_operations.yml.lock
index 1e2f1e3..84beca7 100644
--- a/usegalaxy.cz/collection_operations.yml.lock
+++ b/usegalaxy.cz/collection_operations.yml.lock
@@ -5,6 +5,7 @@ tools:
 - name: unzip
   owner: imgteam
   revisions:
+  - 28d6129b2901
   - 38eec75fbe9b
   - 4634764e6e2b
   - 57f0914ddb7b
diff --git a/usegalaxy.cz/graph_display_data.yml.lock b/usegalaxy.cz/graph_display_data.yml.lock
index 39dbea7..df82938 100644
--- a/usegalaxy.cz/graph_display_data.yml.lock
+++ b/usegalaxy.cz/graph_display_data.yml.lock
@@ -22,6 +22,7 @@ tools:
   - 36b848d5f3ec
   - 59fd173ac850
   - 7dd841a32245
+  - 86d0ebe09628
   tool_panel_section_id: graph_display_data
   tool_panel_section_label: Graph/Display Data
 - name: ucsc_custom_track
diff --git a/usegalaxy.cz/metagenomic_analysis.yml.lock b/usegalaxy.cz/metagenomic_analysis.yml.lock
index 31cc307..1bacc77 100644
--- a/usegalaxy.cz/metagenomic_analysis.yml.lock
+++ b/usegalaxy.cz/metagenomic_analysis.yml.lock
@@ -406,6 +406,7 @@ tools:
 - name: maxbin2
   owner: mbernt
   revisions:
+  - 0917b2d6010d
   - 2bc40bfbcfb4
   - 8a0473eb465e
   - 9da9706f7ca9
diff --git a/usegalaxy.cz/phylogenetics.yml.lock b/usegalaxy.cz/phylogenetics.yml.lock
index 3dbe4b7..4d23709 100644
--- a/usegalaxy.cz/phylogenetics.yml.lock
+++ b/usegalaxy.cz/phylogenetics.yml.lock
@@ -7,11 +7,13 @@ tools:
   revisions:
   - 0407236012e5
   - 9d83d1ab0330
+  - e0d7277ae941
   tool_panel_section_id: phylogenetics
   tool_panel_section_label: Phylogenetics
 - name: hyphy_busted
   owner: iuc
   revisions:
+  - 5da8672e89a3
   - caf23deba39a
   - e908c4003bd8
   tool_panel_section_id: phylogenetics
@@ -21,6 +23,7 @@ tools:
   revisions:
   - 35723f87964d
   - 4515f2f64e13
+  - ab9d1d5d5e29
   tool_panel_section_id: phylogenetics
   tool_panel_section_label: Phylogenetics
 - name: hyphy_gard
@@ -28,12 +31,14 @@ tools:
   revisions:
   - 5b777002c2de
   - 659517798cc4
+  - 9127799ac97e
   tool_panel_section_id: phylogenetics
   tool_panel_section_label: Phylogenetics
 - name: hyphy_absrel
   owner: iuc
   revisions:
   - '841557158611'
+  - 8db8d509d51b
   - a6619171428e
   tool_panel_section_id: phylogenetics
   tool_panel_section_label: Phylogenetics
@@ -41,6 +46,7 @@ tools:
   owner: iuc
   revisions:
   - 1b893cdead55
+  - 6bc07d6011c0
   - 6e72195b364a
   tool_panel_section_id: phylogenetics
   tool_panel_section_label: Phylogenetics
@@ -49,11 +55,13 @@ tools:
   revisions:
   - a73fff151e38
   - cf51d3630757
+  - e05a908455f4
   tool_panel_section_id: phylogenetics
   tool_panel_section_label: Phylogenetics
 - name: hyphy_sm19
   owner: iuc
   revisions:
+  - 6971ee03a002
   - a809f93e7e6d
   - d52a803b2b5c
   tool_panel_section_id: phylogenetics
@@ -62,12 +70,14 @@ tools:
   owner: iuc
   revisions:
   - 5fd8dc04d6af
+  - 7852b50fabb7
   - d5d909979314
   tool_panel_section_id: phylogenetics
   tool_panel_section_label: Phylogenetics
 - name: hyphy_slac
   owner: iuc
   revisions:
+  - 1122d1a1ff67
   - 1467fb7e162d
   - 2753a5c7597a
   tool_panel_section_id: phylogenetics
@@ -77,6 +87,7 @@ tools:
   revisions:
   - b110a31a9c61
   - ec783806a5c3
+  - ef2129a50a13
   tool_panel_section_id: phylogenetics
   tool_panel_section_label: Phylogenetics
 - name: t_coffee
@@ -93,6 +104,7 @@ tools:
   revisions:
   - 5eb9d7217640
   - 7207313de5a8
+  - fba248cbd49e
   tool_panel_section_id: phylogenetics
   tool_panel_section_label: Phylogenetics
 - name: sarscov2formatter
@@ -208,6 +220,7 @@ tools:
   owner: iuc
   revisions:
   - 6761212b7f1d
+  - b30255d232d2
   - beeeed9665ea
   tool_panel_section_id: phylogenetics
   tool_panel_section_label: Phylogenetics
@@ -215,6 +228,7 @@ tools:
   owner: iuc
   revisions:
   - 2318841ec191
+  - 5b4fd931a989
   - 91cf1290ba6f
   tool_panel_section_id: phylogenetics
   tool_panel_section_label: Phylogenetics
@@ -222,6 +236,7 @@ tools:
   owner: iuc
   revisions:
   - 31e7f5a25db3
+  - ea698cd7e086
   - f5bbd4b34541
   tool_panel_section_id: phylogenetics
   tool_panel_section_label: Phylogenetics
@@ -230,6 +245,7 @@ tools:
   revisions:
   - 6960dd62c983
   - 91679ca1480d
+  - be3e39ccb02b
   tool_panel_section_id: phylogenetics
   tool_panel_section_label: Phylogenetics
 - name: usher_matutils
diff --git a/usegalaxy.cz/variant_calling.yml.lock b/usegalaxy.cz/variant_calling.yml.lock
index b4f6475..0b1ed6d 100644
--- a/usegalaxy.cz/variant_calling.yml.lock
+++ b/usegalaxy.cz/variant_calling.yml.lock
@@ -524,6 +524,7 @@ tools:
 - name: snpeff
   owner: iuc
   revisions:
+  - 3aae4f16ac9e
   - 5b80f544c67f
   - 5c7b70713fb5
   - c7275bd8b4d6
diff --git a/usegalaxy.cz/virology.yml.lock b/usegalaxy.cz/virology.yml.lock
index 0f4cf35..051bfa8 100644
--- a/usegalaxy.cz/virology.yml.lock
+++ b/usegalaxy.cz/virology.yml.lock
@@ -73,12 +73,14 @@ tools:
   - 08c2d81e7942
   - 11c062caec10
   - 1f467ed22412
+  - 5b9314d73110
   - eccec0876e54
   tool_panel_section_id: virology
   tool_panel_section_label: Virology
 - name: freyja_demix
   owner: iuc
   revisions:
+  - 945b31d82638
   - c0a0e79d7196
   - e7a2086a0f03
   - e9f497a660d6
@@ -92,6 +94,7 @@ tools:
   - a09398bc953a
   - cd5d77d118f2
   - dda5772507b2
+  - e78fe0649ed4
   tool_panel_section_id: virology
   tool_panel_section_label: Virology
 - name: freyja_aggregate_plot
@@ -101,6 +104,7 @@ tools:
   - 1f89eeba299a
   - 3d9253661554
   - 640c0b8cc8bf
+  - d0632d8bac6a
   tool_panel_section_id: virology
   tool_panel_section_label: Virology
 - name: cooc_mutbamscan