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@COMBINE-lab

COMBINE lab

COMputational BIology and Network Evolution lab

Popular repositories

  1. salmon Public

    🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

    C++ 487 126

  2. An efficient index for the colored, compacted, de Bruijn graph

    C++ 85 17

  3. RapMap Public

    Rapid sensitive and accurate read mapping via quasi-mapping

    C++ 82 24

  4. wasabi Public

    Prepare Sailfish and Salmon output for downstream analysis

    R 39 7

  5. 🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.

    Rust 36 3

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