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@CPTPGenomicTranscriptomic

Center for Pathophysiology of Toulouse Purpan genomic and transcriptomic platform

The genomic and transcriptomic platform was set up in 2017 to coordinate NGS CPTP analyses coming from RNAseq, ChIPseq and ATACseq experiments.

Popular repositories

  1. Clean cytometry data using FlowAI R package through a new Rshiny interface

    R

  2. Forked from Bohdan-Khomtchouk/shinyheatmap

    Web application for enormous biological heatmaps

    R

  3. Clean cytometry data using FlowClean R package through a Rshiny interface.

    R

  4. Forked from YaoLab-Bioinfo/shinyCircos

    an R/shiny application for creation of Circos plot interactively

    HTML

  5. Forked from shenlab-sinai/Gene-Attributes

    A shiny app that obtains Ensembl gene ID, gene names, the coordinates and description of an input file using biomaRt package.

    R

  6. A shiny app that obtains Ensembl gene ID, gene names, the coordinates and description of multiple input files using biomaRt package.

    R

Repositories

  • msisensor Public

    microsatellite instability detection using tumor only or paired tumor-normal data

    C++ 0 MIT 50 0 0 Updated Oct 20, 2020
  • R 0 13 0 0 Updated Feb 25, 2020
  • ShinyFlowClean Public

    Clean cytometry data using FlowClean R package through a Rshiny interface.

    R 0 0 0 0 Updated Feb 25, 2020
  • OpenCyto Public

    R/shiny interface for Automated Flow Data Analysis

    R 0 0 0 0 Updated Feb 4, 2020
  • UTechSCB-SCHNAPPs Public

    Shiny app for the analysis of single cell data

    R 0 2 0 0 Updated Jan 10, 2020
  • idep Public

    Integrated Differential Expression and Pathway analysis

    R 0 52 0 0 Updated Nov 14, 2019
  • FlowAIAll Public

    Clean cytometry data using FlowAI R package through a new Rshiny interface

    R 0 0 0 0 Updated Oct 23, 2019
  • cytofkit Public

    cytofkit: an integrated flow/mass cytometry data analysis pipeline

    R 0 23 0 0 Updated Sep 17, 2019
  • ISEE Public
    R 0 MIT 0 0 0 Updated Aug 26, 2019
  • shinyheatmap Public

    Web application for enormous biological heatmaps

    R 0 GPL-3.0 22 0 0 Updated Jul 9, 2019

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