---

ANUBIS is a Python framework to analyze Tn-seq data.

Requirements

Specific libraries are required by ANUBIS. We provide a requirements file to install everything at once. To do so, you will need first to have pip installed and then run:

pip3 --version                      # Check if installed
sudo apt-get install python3-pip    # if you need to install pip, you can check installation with the previous command
pip3 install -r requirements.txt

Installation & Help

Download this repository and run:

python3 setup.py install

You may require to call it using sudo. Once installed, anubis will be integrated in your python distribution.

In the case you need to install the package in a specific directory of your system, you can call the argument --install-lib followed by a directory path:

python3 setup.py install --install-lib /custom/path/

Examples

A short manual with examples can be visited from this same repository. We are currently writing a more in detail documentation.

Contact

This project has been fully developed at Centre for Genomic Regulation at the group of Design of Biological Systems.

If you experience any problem at any step involving the program, you can use the 'Issues' page of this repository or contact:

Miravet-Verde, Samuel
Lluch-Senar, Maria
Serrano, Luis

License

ANUBIS is under a common GNU GENERAL PUBLIC LICENSE. Plese, check LICENSE for further information.

[2020] - Centre de Regulació Genòmica (CRG) - All Rights Reserved*