@CTMM-TraIT

CTMM TraIT

  • OpenClinica

    Forked from OpenClinica/OpenClinica

    The CTMM-TraIT repository of OpenClinica with custom changes and bug fixes

    Java 132 Updated Jul 7, 2017

  • CLUC-Data

    A single static HTML homepage for CLUC data set. The domain is cluc.trait-platform.org, which is referenced in the paper of ELIXIR Trait Implementation Study (Chao Zhang et al. 2017)

    elixir cluc
    Updated Jul 6, 2017

  • Open-Clinica-Data-Uploader

    Forked from thehyve/Open-Clinica-Data-Uploader

    Next version of Open Clinica Data Importer

    Java 1 3 Updated Jul 5, 2017

  • trait_ctp

    CTMM-TraIT Clinical Trial Processor (CTP) repository

    Java 1 Updated Jul 3, 2017

  • trait_openclinica_selenium_scripts

    The TraIT selenium scritps to monitor the OpenClinica performance

    Java Updated Apr 3, 2017

  • transmart-core-db

    Forked from transmart/transmart-core-db

    TranSMART Core

    Groovy 29 Updated Jul 29, 2016

  • transmartApp

    Forked from transmart/transmartApp

    tranSMART is a knowledge management platform that enables scientists to develop and refine research hypotheses by investigating correlations between genetic and phenotypic data, and assessing their analytical results in the context of published literature and other work.

    JavaScript 1 77 Updated Jul 29, 2016

  • transmart-rest-api

    Forked from transmart/transmart-rest-api

    HTTP available tranSMART RESTful API

    Groovy 11 Updated Jul 29, 2016

  • transmart-metacore-plugin

    Forked from transmart/transmart-metacore-plugin

    The tranSMART plugin Metacore

    Groovy 5 Updated Jul 29, 2016

  • transmart-legacy-db

    Forked from transmart/transmart-legacy-db

    Contains the Grails domain declarations of the legacy transmart schema

    Groovy 6 Updated Jul 29, 2016

  • transmart-gwas-plugin

    Forked from transmart/transmart-gwas-plugin

    The transmart (and grails) plugin that contains the GWAS elements.

    PLSQL 14 Updated Jul 29, 2016

  • transmart-extensions

    Forked from transmart/transmart-extensions

    Elements that are being collected for refactoring but do not yet have a home. This project needs to be reviewed often!

    Java 8 Updated Jul 29, 2016

  • transmart-core-api

    Forked from transmart/transmart-core-api

    constraints

    Groovy 17 Updated Jul 29, 2016

  • folder-management-plugin

    Forked from transmart/folder-management-plugin

    The transmart (and grails) plugin that contains the folder-management elements.

    Groovy 14 Updated Jul 29, 2016

  • blend4j-plugin

    Forked from transmart/blend4j-plugin

    blend4j-plugin is a grails plugin to access galaxy.

    Groovy 4 Updated Jul 29, 2016

  • Rmodules

    Forked from transmart/Rmodules

    A R statistical analysis module plugin for tranSMART

    Groovy 38 Updated Jul 29, 2016

  • SmartR

    Forked from thehyve/SmartR
    JavaScript 4 Updated Jul 5, 2016

  • trait_open_clinica_upload_tool_2

    TraIT OpenClinica Upload Tool

    C# 2 Updated May 4, 2016

  • trait_odm_to_i2b2

    TraIT ODM to i2b2 (OpenClinica to transMART converter)

    Java 3 4 Updated Mar 2, 2016

  • trait_ocws

    OpenClinica functionality accessed by Web-Services using MirthConnect

    Java Updated Feb 29, 2016

  • trait_open_clinica_installation

    Contains custom CTMM-TraIT scripts and fixes which are performed on upgrades and installations of OpenClinica

    XSLT Updated Feb 16, 2016

  • trait_workflow_runner

    The workflow runner simplifies using the Galaxy API from Java. Our main use case is enabling tranSMART users to run Galaxy workflows. The component is usable with other systems (even different workflow engines) and uses the blend4j library for accessing Galaxy servers.

    Java 2 1 Updated Jan 25, 2016

  • transmart-mydas

    Forked from thehyve/transmart-mydas
    Java 5 Updated Dec 2, 2015

  • dalliance-plugin

    Forked from thehyve/dalliance-plugin
    JavaScript 4 Updated Dec 2, 2015

  • transmart-xnat-importer-plugin

    Forked from evast/transmart-xnat-importer-plugin
    Groovy 3 Updated Dec 2, 2015

  • trait_bmia

    CTMM-TraIT BMIA repository

    Java 1 1 Updated Jul 3, 2014

  • wp6_nbia

    NBIA tools and patches

    Java 1 Updated Jul 1, 2014

  • ruud_stuff

    test

    Updated Jun 19, 2014

  • Ephrin

    Proteomics Project Tracking Software

    Java 1 Updated Jun 16, 2014

  • trait_proteomics_qc_tool

    TraIT Proteomics QC Tool

    Java 2 3 Updated Jun 14, 2014
    • 12

    People
    @arjanvandervelde @cdejonge @FreekDB @ilarischeinin @jacobrousseau @jambelien @jannekevdp @keesvanbochove @ptdeboer @rnugraha @shiltemann @yhoogstrate