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| # This is the configuration file for the ODM-to-i2b2 converter. Please specify the values | |
| # of the properties after the = signs according to your needs. | |
| # The path to the file with log4j properties for logging errors, warnings, info, etc. | |
| # log4j-properties-file=src/main/resources/log4j.xml | |
| log4j-properties-file=log4j.xml | |
| # The property below specifies the maximum length that a clinical data entry may have. | |
| # Longer strings will be cut off in order to assure that the length of the string does | |
| # not become larger than the indicated value. | |
| max-clinical-data-entry=256 | |
| # The following regular expression specifies which symbols should be removed at all from the | |
| # output to the files. Leave blank if all symbols are allowed. Put the forbidden symbols | |
| # between two square brackets: [abc] when a, b and c are forbidden. Symbols that are used in | |
| # regular expressions should be preceded with two backslashes: [ab\\[\\]] when a, b, [ and ] | |
| # are forbidden. | |
| forbidden-symbols-regex=[`'"<>\\[\\]] | |
| # tranSMART deals badly with certain symbols. For this reason the following rules are | |
| # required for export to tranSMART: | |
| # replace all ` by ' | |
| # replace all \ by / | |
| # replace n times " by exactly 2 times " (hence by "") | |
| # in concepts: replace + by and (space and space) | |
| # Set avoid-transmart-symbol-bugs to true if these rules are required. | |
| # Set to false otherwise. | |
| avoid-transmart-symbol-bugs=false | |