diff --git a/lifelines/datasets/__init__.py b/lifelines/datasets/__init__.py index 5e0474fd5..0ef3a5ed4 100644 --- a/lifelines/datasets/__init__.py +++ b/lifelines/datasets/__init__.py @@ -298,3 +298,27 @@ def load_g3(**kwargs): time 53 """ return load_dataset('g3.csv', **kwargs) + + +def load_gbsg2(**kwargs): + """ + A data frame containing the observations from the GBSG2 study of 686 women. + + W. Sauerbrei and P. Royston (1999). Building multivariable prognostic and diagnostic models: transformation of the predictors by using fractional polynomials. Journal of the Royal Statistics Society Series A, Volume 162(1), 71–94 + + M. Schumacher, G. Basert, H. Bojar, K. Huebner, M. Olschewski, W. Sauerbrei, C. Schmoor, C. Beyerle, R.L.A. Neumann and H.F. Rauschecker for the German Breast Cancer Study Group (1994), Randomized 2 × 2 trial evaluating hormonal treatment and the duration of chemotherapy in node- positive breast cancer patients. Journal of Clinical Oncology, 12, 2086–2093 + + Size: (686,10) + Example: + horTh yes + age 56 + menostat Post + tsize 12 + tgrade II + pnodes 7 + progrec 61 + estrec 77 + time 2018 + cens 1 + """ + return load_dataset('gbsg2.csv', **kwargs) diff --git a/lifelines/datasets/gbsg2.csv b/lifelines/datasets/gbsg2.csv new file mode 100644 index 000000000..7c22906fe --- /dev/null +++ b/lifelines/datasets/gbsg2.csv @@ -0,0 +1,687 @@ +horTh,age,menostat,tsize,tgrade,pnodes,progrec,estrec,time,cens +no,70,Post,21,II,3,48,66,1814,1 +yes,56,Post,12,II,7,61,77,2018,1 +yes,58,Post,35,II,9,52,271,712,1 +yes,59,Post,17,II,4,60,29,1807,1 +no,73,Post,35,II,1,26,65,772,1 +no,32,Pre,57,III,24,0,13,448,1 +yes,59,Post,8,II,2,181,0,2172,0 +no,65,Post,16,II,1,192,25,2161,0 +no,80,Post,39,II,30,0,59,471,1 +no,66,Post,18,II,7,0,3,2014,0 +yes,68,Post,40,II,9,16,20,577,1 +yes,71,Post,21,II,9,0,0,184,1 +yes,59,Post,58,II,1,154,101,1840,0 +no,50,Post,27,III,1,16,12,1842,0 +yes,70,Post,22,II,3,113,139,1821,0 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+yes,50,Post,23,II,8,98,30,554,1 +no,44,Pre,5,II,10,11,10,790,1 +no,54,Post,22,II,2,211,129,1340,0 +no,52,Pre,30,II,12,11,20,490,1 +no,34,Pre,3,III,1,14,11,1557,0 +no,64,Post,33,III,3,20,14,594,1 +yes,54,Post,19,III,9,9,2,828,0 +no,65,Post,27,II,4,148,191,594,1 +no,49,Pre,24,II,11,106,62,841,0 +yes,70,Post,17,I,1,142,329,695,0 +yes,47,Pre,30,I,3,195,45,2556,0 +no,51,Pre,20,II,1,77,89,1753,1 +no,63,Post,15,III,5,0,0,417,1 +no,36,Pre,30,III,2,0,0,956,1 +yes,63,Post,34,II,12,223,236,1846,0 +no,47,Pre,70,II,5,796,24,1703,0 +no,51,Pre,21,III,1,0,0,1720,0 +yes,62,Post,30,II,1,88,544,1355,0 +no,56,Post,40,III,3,0,0,1603,0 +no,62,Post,33,I,5,239,76,476,1 +yes,61,Post,30,II,8,472,293,1350,0 +yes,55,Post,15,III,3,97,194,1341,0 +yes,56,Post,11,II,1,270,369,2449,0 +no,69,Post,22,II,8,282,191,2286,1 +no,57,Post,25,II,3,48,65,456,1 +no,27,Pre,22,II,1,56,99,536,1 +no,38,Pre,25,II,1,102,11,612,1 +no,42,Pre,25,III,2,11,10,2034,1 +no,69,Post,19,I,3,73,386,1990,1 +no,61,Post,50,II,4,10,10,2456,1 +no,53,Pre,13,III,3,10,20,2205,0 +no,50,Pre,25,III,1,24,85,544,1 +no,52,Pre,27,II,5,0,8,336,1 +no,47,Pre,38,II,2,58,10,2057,0 +no,65,Post,27,II,19,23,13,575,1 +no,48,Pre,38,II,3,92,41,2011,0 +no,61,Post,38,II,17,46,52,537,1 +yes,47,Pre,12,II,1,110,14,2217,0 +no,46,Post,20,II,11,680,152,1814,1 +yes,59,Post,15,II,1,30,122,890,1 +yes,60,Post,22,III,1,218,442,1114,0 +no,65,Post,33,II,6,11,28,974,0 +yes,44,Pre,28,II,1,0,0,296,0 +yes,45,Pre,100,II,6,178,77,2320,0 +no,58,Post,35,I,6,130,162,795,1 +no,51,Post,40,II,8,132,64,867,1 +no,49,Pre,15,II,1,111,19,1703,0 +no,43,Pre,30,II,2,32,16,670,1 +no,37,Pre,35,II,7,53,19,981,1 +no,51,Pre,30,II,2,505,270,1094,0 +yes,48,Pre,35,II,1,340,32,755,1 +no,54,Post,21,II,7,6,8,1388,1 +no,64,Post,21,III,1,4,3,1387,1 +no,44,Pre,55,III,4,8,8,535,1 +no,67,Post,30,II,2,5,14,1653,0 +no,63,Post,24,II,3,46,25,1904,0 +yes,42,Pre,28,III,4,27,22,1868,0 +yes,60,Post,12,I,2,402,90,1767,0 +no,39,Pre,20,II,1,38,110,855,1 +no,53,Post,16,II,1,16,120,1157,1 +yes,38,Pre,61,II,8,624,569,1869,0 +no,61,Post,40,I,15,185,206,1152,0 +no,47,Pre,15,II,1,38,0,1401,0 +no,52,Post,25,III,3,10,15,918,0 +no,67,Post,65,II,8,0,0,745,1 +yes,61,Post,25,II,18,595,419,1283,0 +yes,57,Post,15,II,3,44,78,1481,1 +yes,42,Pre,9,I,8,77,40,1807,0 +yes,39,Pre,20,III,1,2,2,542,1 +no,34,Pre,50,III,7,4,1,1441,0 +yes,52,Pre,50,II,7,45,39,1277,0 +yes,53,Pre,45,II,4,395,44,1486,0 +no,49,Pre,20,I,3,151,16,273,0 +yes,46,Pre,23,III,8,2,1,177,1 +no,36,Pre,36,II,1,76,14,545,1 +no,39,Pre,28,II,3,5,4,1185,0 +no,46,Pre,28,III,16,12,8,631,0 +no,47,Pre,70,II,1,51,28,995,0 +no,46,Pre,45,I,9,239,58,1088,0 +no,47,Pre,35,II,1,48,68,877,0 +no,57,Post,18,II,6,74,124,798,0 +yes,60,Post,25,II,7,116,435,2380,0 +yes,64,Post,36,II,2,122,198,1679,1 +yes,54,Post,40,III,4,3,2,498,1 +no,54,Post,27,II,5,138,23,2138,0 +no,46,Pre,35,II,6,405,27,2175,0 +no,49,Pre,17,II,2,324,94,2271,0 +no,50,Pre,18,III,1,1,4,17,0 +yes,55,Post,15,II,3,16,14,964,1 +yes,45,Pre,23,II,4,1,4,540,1 +no,51,Post,30,III,10,15,103,747,1 +no,43,Pre,25,II,11,1,1,650,1 +yes,59,Post,30,II,13,7,81,410,1 +no,59,Post,27,III,20,9,2,624,1 +no,47,Pre,28,III,7,16,92,1560,0 +no,48,Pre,35,III,10,2,222,455,1 +no,47,Pre,16,II,2,128,18,1629,0 +no,49,Post,21,II,5,80,152,1730,0 +yes,65,Post,25,III,2,17,14,1483,0 +no,60,Post,21,II,1,58,701,687,1 +no,52,Post,35,III,1,8,5,308,1 +no,48,Post,22,II,4,14,0,563,1 +yes,62,Post,20,II,1,100,100,46,0 +no,46,Post,20,II,2,32,29,2144,0 +no,59,Post,21,II,4,0,75,344,1 +yes,69,Post,21,III,1,51,749,945,0 +yes,68,Post,45,I,3,31,145,1905,0 +yes,74,Post,35,II,11,10,472,855,1 +no,45,Pre,50,I,2,132,200,2370,0 +no,43,Pre,55,II,1,23,45,853,0 +no,44,Pre,28,III,4,350,127,692,0 +yes,44,Pre,24,III,5,187,62,475,1 +yes,72,Post,17,II,1,229,533,2195,0 +yes,80,Post,7,II,7,2380,972,758,0 +yes,49,Pre,100,II,35,84,24,648,1 +no,57,Post,12,I,1,84,24,761,0 +no,60,Post,32,III,8,162,315,596,0 +no,76,Post,37,III,24,11,0,195,1 +yes,57,Post,35,II,4,18,0,473,1 +yes,75,Post,16,I,1,250,533,747,0 +yes,62,Post,22,II,1,263,34,2659,0 +yes,46,Pre,60,II,19,2,16,1977,1 +yes,53,Post,17,II,1,25,30,2401,0 +no,43,Pre,20,II,3,980,45,1499,0 +no,51,Post,32,III,10,0,0,1856,0 +no,41,Pre,30,III,11,6,5,595,1 +no,63,Post,45,III,2,530,328,2148,0 +yes,41,Pre,20,III,3,13,1,2126,0 +yes,74,Post,30,III,12,432,246,1975,1 +yes,57,Post,30,II,1,17,83,1641,1 +yes,44,Pre,20,II,6,150,67,1717,0 +yes,48,Pre,24,II,1,211,187,1858,0 +no,47,Pre,15,III,1,139,36,2049,0 +yes,70,Post,25,II,4,34,273,1502,1 +no,49,Pre,14,II,1,160,12,1922,0 +yes,49,Post,24,II,2,120,117,1818,0 +yes,58,Post,35,II,11,2,76,1100,0 +no,59,Post,30,II,1,87,8,1499,0 +no,60,Post,35,II,2,5,4,359,1 +yes,63,Post,30,I,5,144,221,1645,0 +no,44,Pre,15,II,1,175,88,1356,0 +yes,79,Post,23,I,1,60,80,1632,0 +no,47,Pre,25,I,1,38,44,967,0 +yes,61,Post,30,II,1,24,38,1091,0 +yes,64,Post,35,II,3,47,64,918,1 +yes,51,Pre,21,II,1,3,2,557,1 +no,44,Pre,22,II,2,107,94,1219,1 +yes,60,Post,25,I,3,78,363,2170,0 +yes,55,Post,50,II,1,14,203,729,1 +no,70,Post,80,III,8,0,0,1449,1 +no,65,Post,20,I,2,912,606,991,1 +no,53,Pre,20,II,2,89,36,481,1 +yes,54,Post,25,III,3,1,83,1655,0 +no,65,Post,25,II,2,86,135,857,1 +yes,62,Post,30,II,2,5,104,369,1 +yes,48,Pre,30,I,3,133,129,1627,0 +yes,48,Post,35,I,2,845,105,1578,0 +no,42,Pre,40,II,10,130,51,732,1 +no,48,Pre,30,II,16,29,43,460,1 +no,66,Post,25,I,2,22,121,1208,0 +yes,63,Post,25,II,13,26,348,730,1 +no,64,Post,35,I,4,858,15,722,0 +yes,68,Post,35,II,2,3,99,717,0 +no,44,Pre,40,II,4,364,159,651,0 +no,43,Pre,27,II,2,91,117,637,0 +no,67,Post,35,II,3,19,38,615,0 +yes,37,Pre,20,II,9,0,0,42,0 +no,54,Post,23,III,10,13,6,307,1 +no,52,Post,17,II,4,558,522,983,1 +no,43,Pre,80,III,11,9,1,120,1 +no,56,Post,31,II,1,45,286,1525,1 +no,42,Post,21,I,4,147,95,1680,0 +no,56,Post,16,II,10,4,2,1730,1 +no,61,Post,36,II,6,107,158,805,1 +no,67,Post,17,II,4,390,386,2388,0 +yes,63,Post,21,I,2,16,241,559,1 +yes,66,Post,20,II,9,1,11,1977,0 +no,37,Pre,25,III,1,13,1,476,1 +yes,71,Post,16,II,1,98,306,1514,0 +no,43,Pre,28,I,1,437,33,1617,0 +no,64,Post,22,III,1,8,11,1094,1 +yes,64,Post,27,II,3,186,139,784,1 +no,46,Pre,32,II,5,9,13,181,1 +no,45,Pre,50,II,7,20,23,415,1 +yes,67,Post,24,II,4,96,90,1120,1 +no,37,Pre,25,III,8,9,0,316,1 +no,65,Post,22,I,6,386,31,637,1 +no,21,Pre,15,II,3,24,25,247,1 +yes,54,Post,21,II,7,25,88,888,0 +no,46,Pre,45,II,8,2,4,622,1 +yes,63,Post,18,II,1,48,18,806,0 +yes,46,Post,31,III,1,6,3,1163,0 +no,58,Post,31,II,2,240,394,1721,0 +no,48,Pre,15,II,2,166,128,741,0 +no,41,Pre,23,III,2,26,4,372,1 +no,32,Pre,17,III,1,19,8,1331,0 +yes,66,Post,42,III,11,412,339,394,1 +no,64,Post,14,II,1,199,604,652,0 +no,50,Pre,13,III,5,8,32,657,0 +no,47,Pre,23,III,2,18,9,567,0 +yes,60,Post,15,I,7,14,8,429,0 +no,49,Pre,23,II,2,98,31,566,0 +yes,57,Post,60,III,18,11,13,15,0 +no,57,Post,50,III,13,22,47,98,1 +yes,67,Post,15,I,1,208,257,368,0 +yes,58,Post,25,I,1,241,28,432,0 +no,61,Post,25,II,2,406,174,319,0 +no,65,Post,22,II,8,4,2,65,0 +no,44,Pre,70,II,19,28,31,16,0 +no,61,Post,18,III,4,8,10,29,0 +no,62,Post,22,II,7,76,153,18,0 +no,51,Pre,50,II,5,360,57,17,0 +yes,47,Post,23,III,5,0,0,308,1 +no,44,Pre,15,II,1,0,0,1965,0 +yes,61,Post,35,III,16,10,13,548,1 +no,48,Pre,21,III,8,0,0,293,1 +yes,51,Pre,16,II,5,167,15,2017,0 +no,66,Post,22,II,4,11,22,1093,0 +no,45,Pre,14,III,1,5,43,792,0 +no,66,Post,21,II,1,9,898,586,1 +yes,69,Post,40,III,1,3,9,1434,0 +no,49,Pre,20,II,7,63,27,67,0 +no,62,Post,12,II,5,142,91,623,0 +yes,33,Pre,19,II,2,0,0,2128,0 +no,46,Pre,30,II,2,26,223,1965,0 +no,47,Pre,20,II,1,48,26,2161,0 +yes,35,Pre,35,II,4,0,0,1183,1 +no,34,Pre,40,III,1,0,37,1108,1 +no,38,Pre,24,I,1,138,82,2065,0 +no,54,Post,27,III,1,27,792,1598,0 +no,31,Pre,55,II,3,28,89,491,1 +no,41,Pre,25,II,5,6,9,1366,1 +no,43,Pre,55,II,1,4,124,424,0 +yes,52,Post,35,II,21,11,57,859,1 +yes,65,Post,25,III,18,0,0,180,1 +no,47,Post,45,II,2,345,42,1625,0 +no,65,Post,10,I,2,213,209,1938,0 +yes,53,Post,37,II,5,345,47,1343,1 +no,45,Pre,15,II,3,28,27,646,1 +no,53,Pre,19,III,1,74,534,2192,0 +yes,50,Post,25,II,3,0,496,502,1 +no,54,Post,50,III,6,7,0,1675,0 +yes,64,Post,40,II,23,16,22,1363,1 +no,29,Pre,15,III,12,18,40,420,1 +no,48,Pre,60,I,4,312,20,982,1 +no,40,Pre,30,III,3,2,16,1459,0 +no,65,Post,35,II,1,7,74,1192,0 +no,50,Post,40,II,1,80,21,1264,0 +no,55,Post,34,II,6,109,477,1095,0 +yes,51,Post,42,II,7,58,75,1078,0 +yes,59,Post,12,III,1,1,3,737,0 +yes,51,Post,4,I,4,638,232,461,0 +no,35,Pre,22,II,13,16,25,465,1 +no,48,Pre,52,II,11,0,0,842,1 +no,48,Post,40,II,1,10,72,918,0 +yes,62,Post,39,II,4,73,235,374,1 +no,47,Pre,40,II,1,44,11,1089,0 +no,51,Post,19,II,2,92,245,1527,0 +no,42,Pre,40,II,10,256,0,285,1 +no,63,Post,27,II,1,0,0,1306,1 +yes,62,Post,20,II,7,0,0,797,1 +no,57,Post,15,II,1,91,125,1441,0 +no,25,Pre,29,II,3,0,0,343,1 +yes,35,Pre,30,III,4,49,288,936,0 +no,51,Pre,30,II,1,119,44,195,0 +no,51,Post,25,II,2,0,80,503,1 +yes,47,Pre,30,II,10,0,0,827,1 +yes,34,Pre,30,II,2,210,49,1427,0 +no,68,Post,30,II,1,20,312,854,0 +yes,64,Post,30,III,12,550,263,177,1 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