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Table of Contents
The source code for the CellProfiler project is hosted in Git repositories administered by GitHub. The code can be checked out from these locations:
- CellProfiler 2 (Python 2.7): https://github.com/CellProfiler/CellProfiler/
- CellProfiler Analyst 2 (Python 2.7): https://github.com/CellProfiler/CellProfiler-Analyst/
- Deprecated versions, no longer actively developed:
- CellProfiler 1.0 (MATLAB, no longer under development): https://github.com/CellProfiler/CellProfiler1.0
- CellProfiler Analyst 1.0 (Java 1.6, no longer under development): https://svn.broadinstitute.org/CellProfiler/trunk/oldCPA/
We perform regular builds of our source code for both CellProfiler and CellProfiler Analyst. They are not as heavily vetted as our releases, but are available here: https://github.com/CellProfiler/CellProfiler/wiki/TrunkBuild.
- CellProfiler-Analyst Developer's version installation for PC
- CellProfiler-Analyst Developer's version installation for Mac
- Installation instructions for compiled versions of CellProfiler-Analyst are available at http://www.cellprofiler.org.