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CellProfiler is open-source cellular image analysis software.
Python Java C++ C Shell Inno Setup

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BatchProfiler
bioformats
cellprofiler
contrib
imagej
killjavabridge
plugins
.gitattributes
.gitignore
COPYING
CPy.py
CellProfiler.iss
CellProfiler.py
CellProfiler64.iss
CellProfilerIcon.icns
CellProfilerIcon.ico
CellProfilerIcon.png
CellProfilerIcon_old.png
CellProfiler_python.bat
CellProfiler_python.command
Cloning_in_git.txt
LICENSE
Makefile.CP2
README.md
TestNewBatch.py
cp_logo_small.png
cpnose.py
decorator.py
external_dependencies.py
install.py
python-2.6.sh
python-centos.sh
setup.py
windows_setup.py

README.md

Mailing list

CellProfiler development is discussed on the cellprofiler-dev mailing list. This is a fairly low-volume mailing list. To subscribe:

https://groups.google.com/a/broadinstitute.org/d/forum/cellprofiler-dev

How to file new issues

There is a special form for submitting new issues with attachments.

Please attach sufficient information to reproduce the bug. For many bugs, it is appropriate to attach a CellProfiler pipeline and an image.

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