{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":656835698,"defaultBranch":"master","name":"CARD-VNTR","ownerLogin":"ChaissonLab","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-06-21T18:35:18.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/35581706?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1687372719.949279","currentOid":""},"activityList":{"items":[{"before":"42fcb88ec0c3d6f5f4818a53bf4ffa1abdd9ed69","after":"3790aa117abcda486d511991452db0863310f5d3","ref":"refs/heads/master","pushedAt":"2023-10-03T22:46:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Update vamos.wdl\n\nAdding back bai to vamosAnnotation","shortMessageHtmlLink":"Update vamos.wdl"}},{"before":"ea29ef8edcf9e86076256912324de853648ae3f6","after":"42fcb88ec0c3d6f5f4818a53bf4ffa1abdd9ed69","ref":"refs/heads/master","pushedAt":"2023-10-03T01:45:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Update vamos.wdl","shortMessageHtmlLink":"Update vamos.wdl"}},{"before":"dd67b4ee44ddf81c298e021d86080ef1c15a0838","after":"ea29ef8edcf9e86076256912324de853648ae3f6","ref":"refs/heads/master","pushedAt":"2023-10-03T00:28:27.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Update vamos.wdl","shortMessageHtmlLink":"Update vamos.wdl"}},{"before":"e70d2f68d588eb30d419a63fc05722fa11ac8eb7","after":"dd67b4ee44ddf81c298e021d86080ef1c15a0838","ref":"refs/heads/master","pushedAt":"2023-10-03T00:13:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Update vamos.wdl","shortMessageHtmlLink":"Update vamos.wdl"}},{"before":"b0c3eefa8b9d3af56f80b5981bade9d1ca671c6a","after":"e70d2f68d588eb30d419a63fc05722fa11ac8eb7","ref":"refs/heads/master","pushedAt":"2023-10-03T00:11:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Update vamos.wdl","shortMessageHtmlLink":"Update vamos.wdl"}},{"before":"16e4e6066ff19f1422406ba42dae9fb7901a2bef","after":"b0c3eefa8b9d3af56f80b5981bade9d1ca671c6a","ref":"refs/heads/master","pushedAt":"2023-10-03T00:04:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Update vamos.wdl","shortMessageHtmlLink":"Update vamos.wdl"}},{"before":"fdbdc23e6e1153bf5a0f39eb0d5faeb98ed81a67","after":"16e4e6066ff19f1422406ba42dae9fb7901a2bef","ref":"refs/heads/master","pushedAt":"2023-10-03T00:03:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Update vamos.wdl","shortMessageHtmlLink":"Update vamos.wdl"}},{"before":"247a2ef02257be4ff55a39753143c107d64b54c4","after":"fdbdc23e6e1153bf5a0f39eb0d5faeb98ed81a67","ref":"refs/heads/master","pushedAt":"2023-10-02T22:04:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Update vamos.wdl","shortMessageHtmlLink":"Update vamos.wdl"}},{"before":"2f8ba40b31391582f37c350777554fe75cf938db","after":"247a2ef02257be4ff55a39753143c107d64b54c4","ref":"refs/heads/master","pushedAt":"2023-10-02T22:03:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Update vamos.wdl to use default output name","shortMessageHtmlLink":"Update vamos.wdl to use default output name"}},{"before":"ec839dbe835ef3eccc96a1cb5cf4e76d483fab78","after":"2f8ba40b31391582f37c350777554fe75cf938db","ref":"refs/heads/master","pushedAt":"2023-10-02T21:44:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Update vamos.wdl\n\nUpdated to reference outfile as vcf.","shortMessageHtmlLink":"Update vamos.wdl"}},{"before":"50357ee2cbcf2996e603a508fd8072e47163425e","after":"ec839dbe835ef3eccc96a1cb5cf4e76d483fab78","ref":"refs/heads/master","pushedAt":"2023-10-02T21:36:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Update vamos.wdl\n\nUpdated to reference a version of vamos with a few bug fixes.","shortMessageHtmlLink":"Update vamos.wdl"}},{"before":"684e6b733be83858aae7e84891e2a588cb19bb6c","after":"50357ee2cbcf2996e603a508fd8072e47163425e","ref":"refs/heads/master","pushedAt":"2023-09-29T18:33:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Update vamos.wdl\n\nAdded back requirement for .bai input.","shortMessageHtmlLink":"Update vamos.wdl"}},{"before":"7608402a66f0c7802c77974461c14c5c2c4cbf02","after":"684e6b733be83858aae7e84891e2a588cb19bb6c","ref":"refs/heads/master","pushedAt":"2023-09-29T00:38:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Update vamos.wdl to not use bam index","shortMessageHtmlLink":"Update vamos.wdl to not use bam index"}},{"before":"d5d0f4fb649cf28a8aad99095bbadacd168a5b78","after":"7608402a66f0c7802c77974461c14c5c2c4cbf02","ref":"refs/heads/master","pushedAt":"2023-09-29T00:31:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Update vamos.wdl to version 1.3.2\n\nFixes memory leaks in 1.3.0 as well as read-based annotation bugs.","shortMessageHtmlLink":"Update vamos.wdl to version 1.3.2"}},{"before":"16e6f857bcef71e946e5b2193cf06f01d09b85da","after":"d5d0f4fb649cf28a8aad99095bbadacd168a5b78","ref":"refs/heads/master","pushedAt":"2023-09-19T20:02:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Update vamos.wdl\n\nThis references vamos version 1.3.0 for STR and faster IO.","shortMessageHtmlLink":"Update vamos.wdl"}},{"before":"2ecfbc3e4f5cd31d7893d144fd582735dabc74d1","after":"16e6f857bcef71e946e5b2193cf06f01d09b85da","ref":"refs/heads/master","pushedAt":"2023-06-23T18:00:38.201Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Updated docker version","shortMessageHtmlLink":"Updated docker version"}},{"before":"fd21ed25aa5c0be19e4eee948874d335f96a7de7","after":"2ecfbc3e4f5cd31d7893d144fd582735dabc74d1","ref":"refs/heads/master","pushedAt":"2023-06-22T00:17:33.420Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Added threads as an option to vamos.","shortMessageHtmlLink":"Added threads as an option to vamos."}},{"before":"ccf405c797d5e94f0340d34c75eefc0ec4240233","after":"fd21ed25aa5c0be19e4eee948874d335f96a7de7","ref":"refs/heads/master","pushedAt":"2023-06-22T00:01:32.457Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Updating option to allow for processing contigs or reads","shortMessageHtmlLink":"Updating option to allow for processing contigs or reads"}},{"before":"df612fe9ef9cd4e9f043b05dc62c80f888f30805","after":"ccf405c797d5e94f0340d34c75eefc0ec4240233","ref":"refs/heads/master","pushedAt":"2023-06-21T23:46:49.028Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Fixing incorrect name","shortMessageHtmlLink":"Fixing incorrect name"}},{"before":"f34aae39abfbd4b9d2d6100e1a3872002450e32d","after":"df612fe9ef9cd4e9f043b05dc62c80f888f30805","ref":"refs/heads/master","pushedAt":"2023-06-21T23:40:45.915Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Fixing duplicated variable","shortMessageHtmlLink":"Fixing duplicated variable"}},{"before":"fde6baa65bcfea4ca4b15cca307c1f02d8db098a","after":"f34aae39abfbd4b9d2d6100e1a3872002450e32d","ref":"refs/heads/master","pushedAt":"2023-06-21T23:39:28.504Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Fixing task names","shortMessageHtmlLink":"Fixing task names"}},{"before":"5bbb7e6f2dd53267a2e8e44d8d525cc4b90d3c4f","after":"fde6baa65bcfea4ca4b15cca307c1f02d8db098a","ref":"refs/heads/master","pushedAt":"2023-06-21T23:38:23.463Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Fixing variables","shortMessageHtmlLink":"Fixing variables"}},{"before":"10ed23f8081c1d82138382ed7fa27fe0d0ff2a97","after":"5bbb7e6f2dd53267a2e8e44d8d525cc4b90d3c4f","ref":"refs/heads/master","pushedAt":"2023-06-21T23:34:26.462Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Updated wdl to allocate local disc space.","shortMessageHtmlLink":"Updated wdl to allocate local disc space."}},{"before":"def15c411fd3747eb3ca0fe9a05b419c10e3d0ff","after":"10ed23f8081c1d82138382ed7fa27fe0d0ff2a97","ref":"refs/heads/master","pushedAt":"2023-06-21T18:41:25.890Z","pushType":"push","commitsCount":1,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"Modified paths","shortMessageHtmlLink":"Modified paths"}},{"before":null,"after":"def15c411fd3747eb3ca0fe9a05b419c10e3d0ff","ref":"refs/heads/master","pushedAt":"2023-06-21T18:38:39.949Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"mchaisso","name":"Mark Chaisson","path":"/mchaisso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1372990?s=80&v=4"},"commit":{"message":"First commit for vamos workflow","shortMessageHtmlLink":"First commit for vamos workflow"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAADjrwPYgA","startCursor":null,"endCursor":null}},"title":"Activity ยท ChaissonLab/CARD-VNTR"}