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18 Open 49 Closed
18 Open 49 Closed
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Difference between vst_out$y and get_residuals()
#70 opened Oct 2, 2020 by frederikziebell
2
Error in get_residuals(), 'log_umi' not found
#69 opened Oct 2, 2020 by frederikziebell
1
Consistency across computers/environments
#68 opened Sep 24, 2020 by Baboon61
2
Error in while ((it <- it + 1) < limit && abs(del) > eps) { : missing value where TRUE/FALSE needed
#65 opened Aug 19, 2020 by morganee261
3
Disk-based data
#63 opened Aug 14, 2020 by willtownes
1
Error in if (sum(outliers) > 0) { : missing value where TRUE/FALSE needed
#62 opened Aug 5, 2020 by bluejek128
3
SCTransform taking hours with very large memory demand
#57 opened Jun 30, 2020 by liqianma7
1
SCTransform on multiple batches
#55 opened May 25, 2020 by Nusob888
2
Mean and variance of normalized gene expression
#54 opened May 4, 2020 by jmbreda
1
SCTransform Normalize Sequencing Depth
#51 opened Mar 19, 2020 by Lesdormis
1
Compare expression vs. FindMarkers
#49 opened Feb 3, 2020 by dagarfield
Comparison to linear regression
#43 opened Sep 25, 2019 by pavlin-policar
2
Spatial transcriptomics
#42 opened Sep 23, 2019 by alextamburino
1
Inclusion of variable not to regress out
#38 opened Aug 26, 2019 by kvittingseerup
2
"umi_corrected" vs original umi in function "sctransform::correct"
#36 opened Aug 23, 2019 by jliu678
3
applying to non-UMI data - update?
#35 opened Aug 21, 2019 by AnnaLaddach
3
Question about Reproducing a Plot in the Paper Introducing the SCTransform (Hafemeister, C., & Satija, R.)
#34 opened Aug 21, 2019 by sainadfensi
2
Grouped analysis (integration, differential gene expression)
#31 opened Jul 15, 2019 by MaxKman
4
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