fix: cnvkit container #996
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khurrammaqbool
requested review from
hassanfa,
ashwini06 and
ivadym
as code owners
Codecov ReportBase: 99.24% // Head: 99.24% // No change to project coverage 👍
Additional details and impacted files@@ Coverage Diff @@
## develop #996 +/- ##
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Coverage 99.24% 99.24%
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Files 29 29
Lines 1722 1722
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Hits 1709 1709
Misses 13 13
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ivadym
approved these changes
Sep 17, 2022
CHANGELOG.rst
Outdated
| @@ -7,7 +7,7 @@ Added: | |||
| * Use of PON reference, if exists for CNVkit tumor-normal analysis https://github.com/Clinical-Genomics/BALSAMIC/pull/982 | |||
| * Added PON version to CLI and config.json https://github.com/Clinical-Genomics/BALSAMIC/pull/983 | |||
| * `cnvpytor` to varcallpy3 container https://github.com/Clinical-Genomics/BALSAMIC/pull/991 | |||
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| * R packages to cnvkit container | |||
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Suggested change
| * R packages to cnvkit container | |
| * R packages to cnvkit container https://github.com/Clinical-Genomics/BALSAMIC/pull/996 |
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This PR:
Added: R packages to cnvkit container.
Review and tests: