diff --git a/definitions/rd_rna_parameters.yaml b/definitions/rd_rna_parameters.yaml index 08292c8f9..c92078099 100755 --- a/definitions/rd_rna_parameters.yaml +++ b/definitions/rd_rna_parameters.yaml @@ -149,15 +149,15 @@ recipe_time: gatk_asereadcounter: 3 gatk_baserecalibration: 5 gatk_haplotypecaller: 6 - gatk_splitncigarreads: 12 + gatk_splitncigarreads: 16 gatk_variantfiltration: 1 genebody_coverage: 3 gffcompare_ar: 1 gzip_fastq: 2 markduplicates: 8 megafusion_ar: 1 - multiqc_ar: 1 merge_fusion_reports: 1 + multiqc_ar: 1 picardtools_collectrnaseqmetrics: 4 picardtools_mergesamfiles: 2 preseq_ar: 3 @@ -165,7 +165,7 @@ recipe_time: rseqc: 3 sacct: 1 salmon_quant: 5 - star_aln: 8 + star_aln: 12 star_fusion: 16 stringtie_ar: 4 svdb_merge_fusion: 1 @@ -223,6 +223,7 @@ recipe_core_number: gffcompare_ar: 1 gzip_fastq: 0 markduplicates: 13 + megafusion_ar: 1 merge_fusion_reports: 1 multiqc_ar: 1 picardtools_collectrnaseqmetrics: 1 @@ -236,7 +237,6 @@ recipe_core_number: star_fusion: 36 stringtie_ar: 36 svdb_merge_fusion: 1 - megafusion_ar: 1 varianteffectpredictor: 1 vcfparser_ar: 1 version_collect_ar: 1