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Merge 4bcbf7b into 4b3ddd5
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jemten committed Mar 17, 2021
2 parents 4b3ddd5 + 4bcbf7b commit 802c846
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Showing 3 changed files with 6 additions and 6 deletions.
8 changes: 4 additions & 4 deletions containers/bwa-mem2/Dockerfile
Expand Up @@ -5,9 +5,9 @@ FROM ubuntu:bionic
################## METADATA ######################

LABEL base_image="ubuntu:bionic"
LABEL version="2"
LABEL version="3"
LABEL software="bwa-mem2"
LABEL software.version="2.2"
LABEL software.version="2.2.1"
LABEL extra.binaries="bwa-mem2"
LABEL maintainer="Clinical-Genomics/MIP"

Expand All @@ -25,7 +25,7 @@ RUN apt-get update && \
WORKDIR /app

## Install bwa-mem2
RUN curl -L https://github.com/bwa-mem2/bwa-mem2/releases/download/v2.2/bwa-mem2-2.2_x64-linux.tar.bz2 \
RUN curl -L https://github.com/bwa-mem2/bwa-mem2/releases/download/v2.2.1/bwa-mem2-2.2.1_x64-linux.tar.bz2 \
| tar jxf -

ENV PATH=/app/bwa-mem2-2.2_x64-linux:${PATH}
ENV PATH=/app/bwa-mem2-2.2.1_x64-linux:${PATH}
2 changes: 1 addition & 1 deletion t/data/test_data/miptest_install_config.yaml
Expand Up @@ -33,7 +33,7 @@ container:
bwa-mem2:
executable:
bwa-mem2:
uri: docker.io/clinicalgenomics/bwa-mem2:2.2
uri: docker.io/clinicalgenomics/bwa-mem2:2.2.1
bedtools:
executable:
bedtools:
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2 changes: 1 addition & 1 deletion templates/mip_install_config.yaml
Expand Up @@ -25,7 +25,7 @@ container:
bwa-mem2:
executable:
bwa-mem2:
uri: docker.io/clinicalgenomics/bwa-mem2:2.2
uri: docker.io/clinicalgenomics/bwa-mem2:2.2.1
bedtools:
executable:
bedtools:
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