diff --git a/data/genomics/homo_sapiens/README.md b/data/genomics/homo_sapiens/README.md
index 7aabb60e1596..fc0bdcd4c0c4 100644
--- a/data/genomics/homo_sapiens/README.md
+++ b/data/genomics/homo_sapiens/README.md
@@ -111,7 +111,7 @@ Downloaded the gtf and gff3 files from Ensembl:
 
 5. Change chromosome name to `chr22`
 6. Replace spaces with tabs
-7. The coordinates in `genome.gtf` were adapted to start from 1
+7. The coordinates in `genome.gtf` were adapted to start from 1, and the last entries that ended in coordinates >40000 were adapted to end at coordinate 40000.
 
 ## Index files
 
diff --git a/data/genomics/homo_sapiens/genome/genome.gtf b/data/genomics/homo_sapiens/genome/genome.gtf
index ed2ae84a2c76..857300a6bab5 100644
--- a/data/genomics/homo_sapiens/genome/genome.gtf
+++ b/data/genomics/homo_sapiens/genome/genome.gtf
@@ -34,11 +34,7 @@ chr22	havana	gene	3337	10681	.	-	.	gene_id "ENSG00000239435"; gene_version "2";
 chr22	havana	transcript	3337	10681	.	-	.	gene_id "ENSG00000239435"; gene_version "2"; transcript_id "ENST00000493696"; transcript_version "2"; gene_name "KCNMB3P1"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; transcript_name "KCNMB3P1-202"; transcript_source "havana"; transcript_biotype "transcribed_unprocessed_pseudogene"; tag "basic"; transcript_support_level "NA";
 chr22	havana_tagene	gene	20869	28084	.	+	.	gene_id "ENSG00000287285"; gene_version "1"; gene_name "AP000547.4"; gene_source "havana_tagene"; gene_biotype "lncRNA";
 chr22	havana_tagene	transcript	20869	28084	.	+	.	gene_id "ENSG00000287285"; gene_version "1"; transcript_id "ENST00000656324"; transcript_version "1"; gene_name "AP000547.4"; gene_source "havana_tagene"; gene_biotype "lncRNA"; transcript_name "AP000547.4-201"; transcript_source "havana_tagene"; transcript_biotype "lncRNA"; tag "basic";
-chr22	havana	gene	29885	43085	.	+	.	gene_id "ENSG00000283633"; gene_version "1"; gene_name "AP000547.3"; gene_source "havana"; gene_biotype "lncRNA";
-chr22	havana	transcript	29885	43085	.	+	.	gene_id "ENSG00000283633"; gene_version "1"; transcript_id "ENST00000592918"; transcript_version "5"; gene_name "AP000547.3"; gene_source "havana"; gene_biotype "lncRNA"; transcript_name "AP000547.3-201"; transcript_source "havana"; transcript_biotype "lncRNA"; tag "basic"; transcript_support_level "1";
-chr22	havana	transcript	29922	43085	.	+	.	gene_id "ENSG00000283633"; gene_version "1"; transcript_id "ENST00000592107"; transcript_version "5"; gene_name "AP000547.3"; gene_source "havana"; gene_biotype "lncRNA"; transcript_name "AP000547.3-202"; transcript_source "havana"; transcript_biotype "lncRNA"; tag "basic"; transcript_support_level "1";
-chr22	havana	transcript	30024	42307	.	+	.	gene_id "ENSG00000283633"; gene_version "1"; transcript_id "ENST00000591299"; transcript_version "1"; gene_name "AP000547.3"; gene_source "havana"; gene_biotype "lncRNA"; transcript_name "AP000547.3-203"; transcript_source "havana"; transcript_biotype "lncRNA"; tag "basic"; transcript_support_level "2";
-chr22	havana	gene	29861	126716	.	+	.	gene_id "ENSG00000100181"; gene_version "22"; gene_name "TPTEP1"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene";
-chr22	havana	transcript	29861	126716	.	+	.	gene_id "ENSG00000100181"; gene_version "22"; transcript_id "ENST00000558085"; transcript_version "6"; gene_name "TPTEP1"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; transcript_name "TPTEP1-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; tag "basic"; transcript_support_level "2";
-chr22	havana	transcript	29885	76804	.	+	.	gene_id "ENSG00000100181"; gene_version "22"; transcript_id "ENST00000400593"; transcript_version "6"; gene_name "TPTEP1"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; transcript_name "TPTEP1-202"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "1";
-chr22	havana	transcript	30018	81783	.	+	.	gene_id "ENSG00000100181"; gene_version "22"; transcript_id "ENST00000426585"; transcript_version "5"; gene_name "TPTEP1"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; transcript_name "TPTEP1-204"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "1";
+chr22	havana	gene	29885	40000	.	+	.	gene_id "ENSG00000283633"; gene_version "1"; gene_name "AP000547.3"; gene_source "havana"; gene_biotype "lncRNA";
+chr22	havana	transcript	29885	40000	.	+	.	gene_id "ENSG00000283633"; gene_version "1"; transcript_id "ENST00000592918"; transcript_version "5"; gene_name "AP000547.3"; gene_source "havana"; gene_biotype "lncRNA"; transcript_name "AP000547.3-201"; transcript_source "havana"; transcript_biotype "lncRNA"; tag "basic"; transcript_support_level "1";
+chr22	havana	transcript	29922	40000	.	+	.	gene_id "ENSG00000283633"; gene_version "1"; transcript_id "ENST00000592107"; transcript_version "5"; gene_name "AP000547.3"; gene_source "havana"; gene_biotype "lncRNA"; transcript_name "AP000547.3-202"; transcript_source "havana"; transcript_biotype "lncRNA"; tag "basic"; transcript_support_level "1";
+chr22	havana	transcript	30024	40000	.	+	.	gene_id "ENSG00000283633"; gene_version "1"; transcript_id "ENST00000591299"; transcript_version "1"; gene_name "AP000547.3"; gene_source "havana"; gene_biotype "lncRNA"; transcript_name "AP000547.3-203"; transcript_source "havana"; transcript_biotype "lncRNA"; tag "basic"; transcript_support_level "2";