diff --git a/Editor/Windows/UnityMCPEditorWindow.cs b/Editor/Windows/UnityMCPEditorWindow.cs
index 999761a9..453dcb8f 100644
--- a/Editor/Windows/UnityMCPEditorWindow.cs
+++ b/Editor/Windows/UnityMCPEditorWindow.cs
@@ -31,10 +31,10 @@ public class UnityMCPEditorWindow : EditorWindow
 
         private List<string> possiblePaths = new()
         {
-            Path.GetFullPath(Path.Combine(Application.dataPath, "unity-mcp", "Python", "server.py")),
-            Path.GetFullPath(Path.Combine(Application.dataPath, "Packages", "com.justinpbarnett.unity-mcp", "Python", "server.py")),
-            Path.GetFullPath(Path.Combine(Application.dataPath, "..", "Library", "PackageCache", "com.justinpbarnett.unity-mcp@*", "Python", "server.py")),
-            Path.GetFullPath(Path.Combine(Application.dataPath, "..", "Packages", "com.justinpbarnett.unity-mcp", "Python", "server.py"))
+            Path.GetFullPath(Path.Combine(Application.dataPath, "unity-mcp", "Python~", "server.py")),
+            Path.GetFullPath(Path.Combine(Application.dataPath, "Packages", "com.justinpbarnett.unity-mcp", "Python~", "server.py")),
+            Path.GetFullPath(Path.Combine(Application.dataPath, "..", "Library", "PackageCache", "com.justinpbarnett.unity-mcp@*", "Python~", "server.py")),
+            Path.GetFullPath(Path.Combine(Application.dataPath, "..", "Packages", "com.justinpbarnett.unity-mcp", "Python~", "server.py"))
         };
 
         [MenuItem("Window/Unity MCP")]
@@ -342,7 +342,7 @@ private string GetPythonDirectory(List<string> possiblePaths)
 
                     foreach (var dir in matchingDirs)
                     {
-                        string candidatePath = Path.Combine(dir, "Python", "server.py");
+                        string candidatePath = Path.Combine(dir, "Python~", "server.py");
 
                         if (File.Exists(candidatePath))
                         {
@@ -457,7 +457,7 @@ private void ShowManualInstructionsWindow(string configPath, McpClient mcpClient
 
         private string FindPackagePythonDirectory()
         {
-            string pythonDir = "/path/to/your/unity-mcp/Python";
+            string pythonDir = "/path/to/your/unity-mcp/Python~";
 
             try
             {
@@ -472,7 +472,7 @@ private string FindPackagePythonDirectory()
                         if (package.name == "com.justinpbarnett.unity-mcp")
                         {
                             string packagePath = package.resolvedPath;
-                            string potentialPythonDir = Path.Combine(packagePath, "Python");
+                        string potentialPythonDir = Path.Combine(packagePath, "Python~");
 
                             if (Directory.Exists(potentialPythonDir) &&
                                 File.Exists(Path.Combine(potentialPythonDir, "server.py")))
@@ -490,7 +490,7 @@ private string FindPackagePythonDirectory()
                 // If not found via Package Manager, try manual approaches
                 // First check for local installation
                 string[] possibleDirs = {
-                    Path.GetFullPath(Path.Combine(Application.dataPath, "unity-mcp", "Python"))
+                    Path.GetFullPath(Path.Combine(Application.dataPath, "unity-mcp", "Python~"))
                 };
 
                 foreach (var dir in possibleDirs)
diff --git a/Python.meta b/Python.meta
deleted file mode 100644
index 0c9d7eb1..00000000
--- a/Python.meta
+++ /dev/null
@@ -1,8 +0,0 @@
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diff --git a/Python/__init__.py.meta b/Python/__init__.py.meta
deleted file mode 100644
index bd400add..00000000
--- a/Python/__init__.py.meta
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@@ -1,7 +0,0 @@
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diff --git a/Python/__pycache__.meta b/Python/__pycache__.meta
deleted file mode 100644
index dcd76456..00000000
--- a/Python/__pycache__.meta
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@@ -1,8 +0,0 @@
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diff --git a/Python/config.py.meta b/Python/config.py.meta
deleted file mode 100644
index 8808fe44..00000000
--- a/Python/config.py.meta
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diff --git a/Python/pyproject.toml.meta b/Python/pyproject.toml.meta
deleted file mode 100644
index 0b1414f5..00000000
--- a/Python/pyproject.toml.meta
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diff --git a/Python/server.py.meta b/Python/server.py.meta
deleted file mode 100644
index 13ba7761..00000000
--- a/Python/server.py.meta
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@@ -1,7 +0,0 @@
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diff --git a/Python/tools.meta b/Python/tools.meta
deleted file mode 100644
index f71a0f83..00000000
--- a/Python/tools.meta
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diff --git a/Python/tools/__init__.py.meta b/Python/tools/__init__.py.meta
deleted file mode 100644
index 93a34b74..00000000
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deleted file mode 100644
index 3c15c116..00000000
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diff --git a/Python/tools/execute_menu_item.py.meta b/Python/tools/execute_menu_item.py.meta
deleted file mode 100644
index 3d0a9689..00000000
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deleted file mode 100644
index 5354ab00..00000000
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diff --git a/Python/tools/manage_editor.py.meta b/Python/tools/manage_editor.py.meta
deleted file mode 100644
index 894c2095..00000000
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diff --git a/Python/tools/manage_gameobject.py.meta b/Python/tools/manage_gameobject.py.meta
deleted file mode 100644
index 0c60c375..00000000
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diff --git a/Python/tools/manage_scene.py.meta b/Python/tools/manage_scene.py.meta
deleted file mode 100644
index 342b47e3..00000000
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deleted file mode 100644
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deleted file mode 100644
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diff --git a/Python/unity_connection.py.meta b/Python/unity_connection.py.meta
deleted file mode 100644
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deleted file mode 100644
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diff --git a/Python/uv.lock.meta b/Python/uv.lock.meta
deleted file mode 100644
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diff --git a/Python/.python-version b/Python~/.python-version
similarity index 100%
rename from Python/.python-version
rename to Python~/.python-version
diff --git a/Python/__init__.py b/Python~/__init__.py
similarity index 100%
rename from Python/__init__.py
rename to Python~/__init__.py
diff --git a/Python/config.py b/Python~/config.py
similarity index 100%
rename from Python/config.py
rename to Python~/config.py
diff --git a/Python/pyproject.toml b/Python~/pyproject.toml
similarity index 100%
rename from Python/pyproject.toml
rename to Python~/pyproject.toml
diff --git a/Python/server.py b/Python~/server.py
similarity index 100%
rename from Python/server.py
rename to Python~/server.py
diff --git a/Python/tools/__init__.py b/Python~/tools/__init__.py
similarity index 100%
rename from Python/tools/__init__.py
rename to Python~/tools/__init__.py
diff --git a/Python/tools/execute_menu_item.py b/Python~/tools/execute_menu_item.py
similarity index 100%
rename from Python/tools/execute_menu_item.py
rename to Python~/tools/execute_menu_item.py
diff --git a/Python/tools/manage_asset.py b/Python~/tools/manage_asset.py
similarity index 100%
rename from Python/tools/manage_asset.py
rename to Python~/tools/manage_asset.py
diff --git a/Python/tools/manage_editor.py b/Python~/tools/manage_editor.py
similarity index 100%
rename from Python/tools/manage_editor.py
rename to Python~/tools/manage_editor.py
diff --git a/Python/tools/manage_gameobject.py b/Python~/tools/manage_gameobject.py
similarity index 100%
rename from Python/tools/manage_gameobject.py
rename to Python~/tools/manage_gameobject.py
diff --git a/Python/tools/manage_scene.py b/Python~/tools/manage_scene.py
similarity index 100%
rename from Python/tools/manage_scene.py
rename to Python~/tools/manage_scene.py
diff --git a/Python/tools/manage_script.py b/Python~/tools/manage_script.py
similarity index 100%
rename from Python/tools/manage_script.py
rename to Python~/tools/manage_script.py
diff --git a/Python/tools/read_console.py b/Python~/tools/read_console.py
similarity index 100%
rename from Python/tools/read_console.py
rename to Python~/tools/read_console.py
diff --git a/Python/unity_connection.py b/Python~/unity_connection.py
similarity index 100%
rename from Python/unity_connection.py
rename to Python~/unity_connection.py
diff --git a/Python/uv.lock b/Python~/uv.lock
similarity index 100%
rename from Python/uv.lock
rename to Python~/uv.lock