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Bonds in the non-standard ligands with alternative conformations are not displayed correctly #108

ishitani opened this Issue Jul 5, 2016 · 1 comment


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ishitani commented Jul 5, 2016

Topology generator creates wrong bonds between different alternative conformations, which results in the incorrect display of the ligands in stick (and simple) representations.

@ishitani ishitani added the bug label Jul 5, 2016

@ishitani ishitani added this to the Release 2.2.2.B milestone Jul 5, 2016


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ishitani commented Jul 26, 2016

Fixed by checking the altconf values of bonding atoms in applyTopology() method.

@ishitani ishitani closed this Jul 26, 2016

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