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irods 4.0 RC1 errors with workflow? #8

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michael-conway opened this issue Mar 24, 2014 · 0 comments
Closed

irods 4.0 RC1 errors with workflow? #8

michael-conway opened this issue Mar 24, 2014 · 0 comments
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[-] iRODS/server/api/src/rsRegDataObj.cpp:64:_rsRegDataObj : status [CAT_INVALID_DATA_TYPE] errno [] -- message [_rsRegDataObj - Failed to register data object "/tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow/eCWkflow.mss" - CAT_INVALID_DATA_TYPE ]

Mar 11 10:03:25 pid:21320 NOTICE: l3DataPutSingleBuf: rsRegDataObj for /tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow/eCWkflow.mss failed, status = -815000
Mar 11 10:03:25 pid:21320 NOTICE: l3DataPutSingleBuf: rsDataObjClose of 3 error, status = -815000
Mar 11 10:03:25 pid:21320 ERROR:
[-] iRODS/server/api/src/rsRegDataObj.cpp:64:_rsRegDataObj : status [CAT_INVALID_DATA_TYPE] errno [] -- message [_rsRegDataObj - Failed to register data object "/tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow/eCWkflow.mss" - CAT_INVALID_DATA_TYPE ]

Mar 11 10:03:25 pid:21320 NOTICE: l3DataPutSingleBuf: rsRegDataObj for /tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow/eCWkflow.mss failed, status = -815000
Mar 11 10:03:25 pid:21320 NOTICE: l3DataPutSingleBuf: rsDataObjClose of 3 error, status = -815000

when running jargon testMountMSSOWorkflow

0 [main] INFO org.irods.jargon.core.connection.IRODSSimpleProtocolManager - creating simple protocol manager
13 [main] INFO org.irods.jargon.core.connection.IRODSSession - IRODS Session creation, loading default properties, these may be overridden...
16 [main] INFO org.irods.jargon.core.pub.IRODSFileSystem - IRODSfileSystem is initialized
62 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - instance() method...calling connection life cycle
62 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - create connection....
62 [main] INFO org.irods.jargon.core.connection.IRODSTCPConnectionFactoryImpl - instance()
66 [main] INFO org.irods.jargon.core.connection.AbstractConnection - AbstractConnection()
66 [main] INFO org.irods.jargon.core.connection.AbstractConnection - opening irods socket
66 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - connect()
66 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - connecting socket to agent
66 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - normal iRODS connection
74 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - connection to socket made...
75 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - default buffer on input stream
75 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - default buffer on input stream
75 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - socket opened successfully
79 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - ...have connection, now authenticate given the auth scheme in the iRODS account...
79 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - authenticate()
80 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - get auth mechanism
80 [main] INFO org.irods.jargon.core.connection.AuthenticationFactoryImpl - instanceAuthMechanism()
81 [main] INFO org.irods.jargon.core.connection.AuthenticationFactoryImpl - authScheme:STANDARD
82 [main] INFO org.irods.jargon.core.connection.AuthenticationFactoryImpl - using standard auth
83 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - authenticate...
92 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
154 [main] INFO org.irods.jargon.core.connection.AuthMechanism - startup response:StartupResponseData:
status:0
relVersion:rods4.0.0b2
apiVersion:d
reconnPort:0
reconnAddr:
cookie:400
154 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - authenticate
154 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - sending standard irods password
155 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
189 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
190 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
196 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - auth was successful
198 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - auth response was:org.irods.jargon.core.connection.auth.AuthResponse@1eebcf2d
198 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - ..authenticated...now decorate and return...
198 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - decorate()
199 [main] INFO org.irods.jargon.core.connection.EnvironmentalInfoAccessor - getting irods server properties
199 [main] INFO org.irods.jargon.core.connection.DiscoveredServerPropertiesCache - now retriving server properties from cache with zone:tempZone
200 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
200 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
201 [main] INFO org.irods.jargon.core.connection.EnvironmentalInfoAccessor - server response obtained
206 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - IRODS server properties
icat enabled?:ICAT_ENABLED
Server boot time:1394541282
Rel version:rods4.0.0b2
API version:d
zone:tempZone
eirods:true

236 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - setting file name, given path = /tempZone/home/test1/jargon-scratch/
236 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - detected local separator = /
236 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - file name was set as: jargon-scratch
236 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - isFileExists()
237 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - checking existence of: /tempZone/home/test1/jargon-scratch
237 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - getObjStat(final String irodsAbsolutePath)
238 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
239 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
308 [main] INFO org.irods.jargon.core.pub.CollectionAndDataObjectListAndSearchAOImpl - objStat:
absolutePath:/tempZone/home/test1/jargon-scratch
dataId:50476
specColType:NORMAL
objectType:COLLECTION
collectionPath:
objectPath:
checksum:
ownerName:test1
ownerZone:tempZone
objSize:0
cacheDir:
cacheDirty:false
createdAt:replNumber:0Tue Mar 11 10:02:48 EDT 2014
modifiedAt:Tue Mar 11 10:02:48 EDT 2014
308 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - isFile() for path:/tempZone/home/test1/jargon-scratch
308 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - isDirectory() for path:/tempZone/home/test1/jargon-scratch
308 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - directoryDeleteNoForce(final IRODSFile irodsFile)
308 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - deleting:/tempZone/home/test1/jargon-scratch
308 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - isDirectory() for path:/tempZone/home/test1/jargon-scratch
309 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - looking up objStat, not cached in file
309 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - getObjStat(final String irodsAbsolutePath)
309 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
309 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
314 [main] INFO org.irods.jargon.core.pub.CollectionAndDataObjectListAndSearchAOImpl - objStat:
absolutePath:/tempZone/home/test1/jargon-scratch
dataId:50476
specColType:NORMAL
objectType:COLLECTION
collectionPath:
objectPath:
checksum:
ownerName:test1
ownerZone:tempZone
objSize:0
cacheDir:
cacheDirty:false
createdAt:replNumber:0Tue Mar 11 10:02:48 EDT 2014
modifiedAt:Tue Mar 11 10:02:48 EDT 2014
316 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
321 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
406 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - deletion successful
406 [main] INFO org.irods.jargon.core.connection.IRODSSession - closing all irods sessions
407 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - closing connection
407 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - shutting down, need to send disconnect to irods
407 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - sending disconnect message
407 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - shutting down connection: true
407 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - is connected for : irods://test1.tempZone@localhost:1247/tempZone/home/test1/main/1394546803316
407 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - now disconnected
407 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - instance() method...calling connection life cycle
407 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - create connection....
407 [main] INFO org.irods.jargon.core.connection.IRODSTCPConnectionFactoryImpl - instance()
408 [main] INFO org.irods.jargon.core.connection.AbstractConnection - AbstractConnection()
408 [main] INFO org.irods.jargon.core.connection.AbstractConnection - opening irods socket
408 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - connect()
408 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - connecting socket to agent
408 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - normal iRODS connection
409 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - connection to socket made...
409 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - default buffer on input stream
409 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - default buffer on input stream
409 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - socket opened successfully
410 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - ...have connection, now authenticate given the auth scheme in the iRODS account...
410 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - authenticate()
418 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - get auth mechanism
418 [main] INFO org.irods.jargon.core.connection.AuthenticationFactoryImpl - instanceAuthMechanism()
419 [main] INFO org.irods.jargon.core.connection.AuthenticationFactoryImpl - authScheme:STANDARD
419 [main] INFO org.irods.jargon.core.connection.AuthenticationFactoryImpl - using standard auth
419 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - authenticate...
419 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
484 [main] INFO org.irods.jargon.core.connection.AuthMechanism - startup response:StartupResponseData:
status:0
relVersion:rods4.0.0b2
apiVersion:d
reconnPort:0
reconnAddr:
cookie:400
484 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - authenticate
484 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - sending standard irods password
485 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
486 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
487 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
492 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - auth was successful
493 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - auth response was:org.irods.jargon.core.connection.auth.AuthResponse@2686a13f
493 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - ..authenticated...now decorate and return...
493 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - decorate()
493 [main] INFO org.irods.jargon.core.connection.EnvironmentalInfoAccessor - getting irods server properties
493 [main] INFO org.irods.jargon.core.connection.DiscoveredServerPropertiesCache - now retriving server properties from cache with zone:tempZone
493 [main] INFO org.irods.jargon.core.connection.EnvironmentalInfoAccessor - returning cached props:IRODS server properties
icat enabled?:ICAT_ENABLED
Server boot time:1394541282
Rel version:rods4.0.0b2
API version:d
zone:tempZone
eirods:true

493 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - IRODS server properties
icat enabled?:ICAT_ENABLED
Server boot time:1394541282
Rel version:rods4.0.0b2
API version:d
zone:tempZone
eirods:true

493 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - setting file name, given path = /tempZone/home/test1/jargon-scratch/jargon-scratch
493 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - detected local separator = /
493 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - file name was set as: jargon-scratch
493 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - mkdir(final IRODSFile irodsFile, final boolean recursiveOpr)
493 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - making dir for:/tempZone/home/test1/jargon-scratch/jargon-scratch
494 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
495 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
518 [main] INFO org.irods.jargon.core.connection.IRODSSession - closing all irods sessions
518 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - closing connection
518 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - shutting down, need to send disconnect to irods
518 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - sending disconnect message
518 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - shutting down connection: true
519 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - is connected for : irods://test1.tempZone@localhost:1247/tempZone/home/test1/main/1394546803651
519 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - now disconnected
519 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - instance() method...calling connection life cycle
519 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - create connection....
519 [main] INFO org.irods.jargon.core.connection.IRODSTCPConnectionFactoryImpl - instance()
519 [main] INFO org.irods.jargon.core.connection.AbstractConnection - AbstractConnection()
519 [main] INFO org.irods.jargon.core.connection.AbstractConnection - opening irods socket
519 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - connect()
519 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - connecting socket to agent
519 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - normal iRODS connection
521 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - connection to socket made...
521 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - default buffer on input stream
522 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - default buffer on input stream
522 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - socket opened successfully
522 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - ...have connection, now authenticate given the auth scheme in the iRODS account...
522 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - authenticate()
522 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - get auth mechanism
522 [main] INFO org.irods.jargon.core.connection.AuthenticationFactoryImpl - instanceAuthMechanism()
522 [main] INFO org.irods.jargon.core.connection.AuthenticationFactoryImpl - authScheme:STANDARD
522 [main] INFO org.irods.jargon.core.connection.AuthenticationFactoryImpl - using standard auth
522 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - authenticate...
522 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
583 [main] INFO org.irods.jargon.core.connection.AuthMechanism - startup response:StartupResponseData:
status:0
relVersion:rods4.0.0b2
apiVersion:d
reconnPort:0
reconnAddr:
cookie:400
583 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - authenticate
583 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - sending standard irods password
583 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
585 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
585 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
590 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - auth was successful
590 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - auth response was:org.irods.jargon.core.connection.auth.AuthResponse@50c442db
590 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - ..authenticated...now decorate and return...
590 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - decorate()
590 [main] INFO org.irods.jargon.core.connection.EnvironmentalInfoAccessor - getting irods server properties
590 [main] INFO org.irods.jargon.core.connection.DiscoveredServerPropertiesCache - now retriving server properties from cache with zone:tempZone
590 [main] INFO org.irods.jargon.core.connection.EnvironmentalInfoAccessor - returning cached props:IRODS server properties
icat enabled?:ICAT_ENABLED
Server boot time:1394541282
Rel version:rods4.0.0b2
API version:d
zone:tempZone
eirods:true

591 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - IRODS server properties
icat enabled?:ICAT_ENABLED
Server boot time:1394541282
Rel version:rods4.0.0b2
API version:d
zone:tempZone
eirods:true

591 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - setting file name, given path = /tempZone/home/test1/jargon-scratch//MountedCollectionAOImplForMSSOTest
591 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - detected local separator = /
591 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - file name was set as: MountedCollectionAOImplForMSSOTest
591 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - mkdir(final IRODSFile irodsFile, final boolean recursiveOpr)
591 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - making dir for:/tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest
591 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
591 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
607 [main] INFO org.irods.jargon.core.connection.IRODSSession - closing all irods sessions
607 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - closing connection
607 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - shutting down, need to send disconnect to irods
607 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - sending disconnect message
607 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - shutting down connection: true
607 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - is connected for : irods://test1.tempZone@localhost:1247/tempZone/home/test1/main/1394546803763
607 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - now disconnected
607 [main] INFO org.irods.jargon.core.connection.IRODSSimpleProtocolManager - creating simple protocol manager
607 [main] INFO org.irods.jargon.core.connection.IRODSSession - IRODS Session creation, loading default properties, these may be overridden...
608 [main] INFO org.irods.jargon.core.pub.IRODSFileSystem - IRODSfileSystem is initialized
614 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - instance() method...calling connection life cycle
614 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - create connection....
614 [main] INFO org.irods.jargon.core.connection.IRODSTCPConnectionFactoryImpl - instance()
614 [main] INFO org.irods.jargon.core.connection.AbstractConnection - AbstractConnection()
614 [main] INFO org.irods.jargon.core.connection.AbstractConnection - opening irods socket
614 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - connect()
614 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - connecting socket to agent
615 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - normal iRODS connection
615 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - connection to socket made...
615 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - default buffer on input stream
615 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - default buffer on input stream
616 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - socket opened successfully
616 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - ...have connection, now authenticate given the auth scheme in the iRODS account...
616 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - authenticate()
616 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - get auth mechanism
616 [main] INFO org.irods.jargon.core.connection.AuthenticationFactoryImpl - instanceAuthMechanism()
616 [main] INFO org.irods.jargon.core.connection.AuthenticationFactoryImpl - authScheme:STANDARD
616 [main] INFO org.irods.jargon.core.connection.AuthenticationFactoryImpl - using standard auth
616 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - authenticate...
618 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
680 [main] INFO org.irods.jargon.core.connection.AuthMechanism - startup response:StartupResponseData:
status:0
relVersion:rods4.0.0b2
apiVersion:d
reconnPort:0
reconnAddr:
cookie:400
680 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - authenticate
680 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - sending standard irods password
680 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
682 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
682 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
688 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - auth was successful
688 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - auth response was:org.irods.jargon.core.connection.auth.AuthResponse@5093acc2
688 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - ..authenticated...now decorate and return...
688 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - decorate()
688 [main] INFO org.irods.jargon.core.connection.EnvironmentalInfoAccessor - getting irods server properties
688 [main] INFO org.irods.jargon.core.connection.DiscoveredServerPropertiesCache - now retriving server properties from cache with zone:tempZone
689 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
689 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
689 [main] INFO org.irods.jargon.core.connection.EnvironmentalInfoAccessor - server response obtained
690 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - IRODS server properties
icat enabled?:ICAT_ENABLED
Server boot time:1394541282
Rel version:rods4.0.0b2
API version:d
zone:tempZone
eirods:true

690 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - setting file name, given path = /tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow
690 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - detected local separator = /
690 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - file name was set as: testMountMSSOWorkflow
690 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - mkdir(final IRODSFile irodsFile, final boolean recursiveOpr)
690 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - making dir for:/tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow
690 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
690 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
717 [main] INFO org.irods.jargon.core.pub.MountedCollectionAOImpl - unmountACollection()
717 [main] INFO org.irods.jargon.core.pub.MountedCollectionAOImpl - absolutePathToCollectionToUnmount:/tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow/testMountMSSOWorkflowMounted
718 [main] INFO org.irods.jargon.core.pub.MountedCollectionAOImpl - resourceName:test1-resc
720 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
721 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
752 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - closing connection
753 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - shutting down, need to send disconnect to irods
753 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - sending disconnect message
755 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - shutting down connection: true
756 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - is connected for : irods://test1.tempZone@localhost:1247/tempZone/home/test1/main/1394546803857
756 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - now disconnected
5560 [main] INFO org.irods.jargon.core.pub.MountedCollectionAOImpl - createAnMSSOMount()
5560 [main] INFO org.irods.jargon.core.pub.MountedCollectionAOImpl - absoluteLocalPathToWssFile:/root/NetBeansProjects/jargon/jargon-core/target/test-classes/msso/eCWkflow.mss
5560 [main] INFO org.irods.jargon.core.pub.MountedCollectionAOImpl - absoluteIRODSTargetPathToTheWssToBeMounted:/tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow/eCWkflow.mss
5561 [main] INFO org.irods.jargon.core.pub.MountedCollectionAOImpl - absolutePathToMountedCollection:/tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow/testMountMSSOWorkflowMounted
5561 [main] INFO org.irods.jargon.core.pub.MountedCollectionAOImpl - putting the wss file as type msso
5571 [main] INFO org.irods.jargon.core.connection.IRODSSession - transfer options based on properties:transferOptions:
maxThreads:4
udpSendRate:600000
udpPacketSize:8192
allowPutGetResourceRedirects:false
computeChecksumAfterTransfer:false
computeAndVerifyChecksumAfterTransfer:false
intraFileStatusCallbacks:false
forceOption:ASK_CALLBACK_LISTENER
useParallelTransfer:true
putOption:NORMAL
checksumEncoding:DEFAULT
5576 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - instance() method...calling connection life cycle
5576 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - create connection....
5576 [main] INFO org.irods.jargon.core.connection.IRODSTCPConnectionFactoryImpl - instance()
5576 [main] INFO org.irods.jargon.core.connection.AbstractConnection - AbstractConnection()
5577 [main] INFO org.irods.jargon.core.connection.AbstractConnection - opening irods socket
5577 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - connect()
5577 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - connecting socket to agent
5577 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - normal iRODS connection
5578 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - connection to socket made...
5578 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - default buffer on input stream
5578 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - default buffer on input stream
5578 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - socket opened successfully
5578 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - ...have connection, now authenticate given the auth scheme in the iRODS account...
5578 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - authenticate()
5579 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - get auth mechanism
5579 [main] INFO org.irods.jargon.core.connection.AuthenticationFactoryImpl - instanceAuthMechanism()
5579 [main] INFO org.irods.jargon.core.connection.AuthenticationFactoryImpl - authScheme:STANDARD
5579 [main] INFO org.irods.jargon.core.connection.AuthenticationFactoryImpl - using standard auth
5579 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - authenticate...
5580 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
5661 [main] INFO org.irods.jargon.core.connection.AuthMechanism - startup response:StartupResponseData:
status:0
relVersion:rods4.0.0b2
apiVersion:d
reconnPort:0
reconnAddr:
cookie:400
5661 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - authenticate
5661 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - sending standard irods password
5661 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
5663 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
5663 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
5671 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - auth was successful
5671 [main] INFO org.irods.jargon.core.connection.StandardIRODSAuth - auth response was:org.irods.jargon.core.connection.auth.AuthResponse@52cc3e77
5671 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - ..authenticated...now decorate and return...
5671 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - decorate()
5671 [main] INFO org.irods.jargon.core.connection.EnvironmentalInfoAccessor - getting irods server properties
5671 [main] INFO org.irods.jargon.core.connection.DiscoveredServerPropertiesCache - now retriving server properties from cache with zone:tempZone
5671 [main] INFO org.irods.jargon.core.connection.EnvironmentalInfoAccessor - returning cached props:IRODS server properties
icat enabled?:ICAT_ENABLED
Server boot time:1394541282
Rel version:rods4.0.0b2
API version:d
zone:tempZone
eirods:true

5672 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocolFactory - IRODS server properties
icat enabled?:ICAT_ENABLED
Server boot time:1394541282
Rel version:rods4.0.0b2
API version:d
zone:tempZone
eirods:true

5778 [main] INFO org.irods.jargon.core.pub.DataTransferOperationsImpl - put operation for source: /root/NetBeansProjects/jargon/jargon-core/target/test-classes/msso/eCWkflow.mss
5778 [main] INFO org.irods.jargon.core.pub.DataTransferOperationsImpl - to target: /tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow/eCWkflow.mss
5778 [main] INFO org.irods.jargon.core.pub.DataTransferOperationsImpl - resource:test1-resc
5778 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - setting file name, given path = /tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow/eCWkflow.mss
5779 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - detected local separator = /
5779 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - file name was set as: eCWkflow.mss
5779 [main] INFO org.irods.jargon.core.pub.DataTransferOperationsImpl - put operation for source: /root/NetBeansProjects/jargon/jargon-core/target/test-classes/msso/eCWkflow.mss
5779 [main] INFO org.irods.jargon.core.pub.DataTransferOperationsImpl - to target: /tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow/eCWkflow.mss
5779 [main] INFO org.irods.jargon.core.pub.DataTransferOperationsImpl - resource:test1-resc
5779 [main] INFO org.irods.jargon.core.pub.DataTransferOperationsImpl - process put with no rerouting
5780 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - isFileExists()
5780 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - checking existence of: /tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow/eCWkflow.mss
5780 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - getObjStat(final String irodsAbsolutePath)
5780 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
5781 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
5791 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - file not found, will treat as not exists
5792 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - setting file name, given path = /tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow
5792 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - detected local separator = /
5792 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - file name was set as: testMountMSSOWorkflow
5792 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - isFileExists()
5792 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - checking existence of: /tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow
5792 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - getObjStat(final String irodsAbsolutePath)
5792 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
5795 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
5798 [main] INFO org.irods.jargon.core.pub.CollectionAndDataObjectListAndSearchAOImpl - objStat:
absolutePath:/tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow
dataId:50485
specColType:NORMAL
objectType:COLLECTION
collectionPath:
objectPath:
checksum:
ownerName:test1
ownerZone:tempZone
objSize:0
cacheDir:
cacheDirty:false
createdAt:replNumber:0Tue Mar 11 10:06:43 EDT 2014
modifiedAt:Tue Mar 11 10:06:43 EDT 2014
5798 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - setting file name, given path = /tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow
5798 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - detected local separator = /
5798 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - file name was set as: testMountMSSOWorkflow
5799 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - isDirectory() for path:/tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow
5799 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - looking up objStat, not cached in file
5799 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - getObjStat(final String irodsAbsolutePath)
5799 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
5799 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
5805 [main] INFO org.irods.jargon.core.pub.CollectionAndDataObjectListAndSearchAOImpl - objStat:
absolutePath:/tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow
dataId:50485
specColType:NORMAL
objectType:COLLECTION
collectionPath:
objectPath:
checksum:
ownerName:test1
ownerZone:tempZone
objSize:0
cacheDir:
cacheDirty:false
createdAt:replNumber:0Tue Mar 11 10:06:43 EDT 2014
modifiedAt:Tue Mar 11 10:06:43 EDT 2014
5806 [main] INFO org.irods.jargon.core.pub.DataTransferOperationsImpl - treating target as a file, using the whole path
5806 [main] INFO org.irods.jargon.core.pub.DataTransferOperationsImpl - computed callbackTargetIrodsPath:/tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow/eCWkflow.mss
5806 [main] INFO org.irods.jargon.core.pub.TransferOperationsHelper - put of single file
5807 [main] INFO org.irods.jargon.core.transfer.DefaultTransferControlBlock - filtering: /root/NetBeansProjects/jargon/jargon-core/target/test-classes/msso/eCWkflow.mss
5807 [main] INFO org.irods.jargon.core.transfer.DefaultTransferControlBlock - no filter
5808 [main] INFO org.irods.jargon.core.pub.DataObjectAOImpl - put operation, localFile: /root/NetBeansProjects/jargon/jargon-core/target/test-classes/msso/eCWkflow.mss
5808 [main] INFO org.irods.jargon.core.pub.DataObjectAOImpl - to irodsFile: /tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow/eCWkflow.mss
5809 [main] INFO org.irods.jargon.core.pub.DataObjectAOImpl - putCommonProcessing()
5809 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - isDirectory() for path:/tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow/eCWkflow.mss
5809 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - looking up objStat, not cached in file
5809 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - getObjStat(final String irodsAbsolutePath)
5809 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
5810 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
5813 [main] INFO org.irods.jargon.core.pub.io.IRODSFileImpl - file not found
5813 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - isFileExists()
5813 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - checking existence of: /tempZone/home/test1/jargon-scratch/MountedCollectionAOImplForMSSOTest/testMountMSSOWorkflow/eCWkflow.mss
5813 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - getObjStat(final String irodsAbsolutePath)
5814 [main] INFO org.irods.jargon.core.connection.IRODSMidLevelProtocol - calling irods function with byte array
5814 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
5816 [main] INFO org.irods.jargon.core.pub.IRODSFileSystemAOImpl - file not found, will treat as not exists
5818 [main] INFO org.irods.jargon.core.pub.DataObjectAOImpl - processing transfer as normal, length below max
5818 [main] INFO org.irods.jargon.core.pub.DataAOHelper - processNormalPutTransfer
5823 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - calling irods function with streams
5824 [main] INFO org.irods.jargon.core.connection.AbstractConnection - total sent:888
5825 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - data sent, getting response
5825 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - reading message from irods
5855 [main] ERROR org.irods.jargon.core.pub.TransferOperationsHelper - exception in transfer
org.irods.jargon.core.exception.JargonException: error code received from iRODS:-815000
at org.irods.jargon.core.connection.IRODSErrorScanner.checkSpecificCodesAndThrowIfExceptionLocated(IRODSErrorScanner.java:211)
at org.irods.jargon.core.connection.IRODSErrorScanner.inspectAndThrowIfNeeded(IRODSErrorScanner.java:117)
at org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol.processMessageInfoLessThanZero(AbstractIRODSMidLevelProtocol.java:1136)
at org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol.readMessage(AbstractIRODSMidLevelProtocol.java:589)
at org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol.readMessage(AbstractIRODSMidLevelProtocol.java:555)
at org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol.irodsFunctionIncludingAllDataInStream(AbstractIRODSMidLevelProtocol.java:322)
at org.irods.jargon.core.pub.DataAOHelper.processNormalPutTransfer(DataAOHelper.java:532)
at org.irods.jargon.core.pub.DataObjectAOImpl.putCommonProcessing(DataObjectAOImpl.java:641)
at org.irods.jargon.core.pub.DataObjectAOImpl.putLocalDataObjectToIRODSCommonProcessing(DataObjectAOImpl.java:551)
at org.irods.jargon.core.pub.DataObjectAOImpl.putLocalDataObjectToIRODS(DataObjectAOImpl.java:399)
at org.irods.jargon.core.pub.TransferOperationsHelper.processPutOfSingleFile(TransferOperationsHelper.java:803)
at org.irods.jargon.core.pub.DataTransferOperationsImpl.processPutAfterAnyConnectionRerouting(DataTransferOperationsImpl.java:984)
at org.irods.jargon.core.pub.DataTransferOperationsImpl.putOperation(DataTransferOperationsImpl.java:861)
at org.irods.jargon.core.pub.DataTransferOperationsImpl.putOperation(DataTransferOperationsImpl.java:1086)
at org.irods.jargon.core.pub.MountedCollectionAOImpl.createAnMSSOMountForWorkflow(MountedCollectionAOImpl.java:351)
at org.irods.jargon.core.pub.MountedCollectionAOImplForMSSOTest.testMountMSSOWorkflow(MountedCollectionAOImplForMSSOTest.java:86)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.runners.BlockJUnit4ClassRunner.runNotIgnored(BlockJUnit4ClassRunner.java:79)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:71)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:49)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.eclipse.jdt.internal.junit4.runner.JUnit4TestReference.run(JUnit4TestReference.java:50)
at org.eclipse.jdt.internal.junit.runner.TestExecution.run(TestExecution.java:38)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.runTests(RemoteTestRunner.java:467)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.runTests(RemoteTestRunner.java:683)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.run(RemoteTestRunner.java:390)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.main(RemoteTestRunner.java:197)
5882 [main] WARN org.irods.jargon.core.pub.TransferOperationsHelper - exception will be re-thrown, as there is no status callback listener
5882 [main] WARN org.irods.jargon.core.pub.DataTransferOperationsImpl - unexpected exception in put operation that should have been caught in the transfer handler
org.irods.jargon.core.exception.JargonException: error code received from iRODS:-815000
at org.irods.jargon.core.connection.IRODSErrorScanner.checkSpecificCodesAndThrowIfExceptionLocated(IRODSErrorScanner.java:211)
at org.irods.jargon.core.connection.IRODSErrorScanner.inspectAndThrowIfNeeded(IRODSErrorScanner.java:117)
at org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol.processMessageInfoLessThanZero(AbstractIRODSMidLevelProtocol.java:1136)
at org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol.readMessage(AbstractIRODSMidLevelProtocol.java:589)
at org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol.readMessage(AbstractIRODSMidLevelProtocol.java:555)
at org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol.irodsFunctionIncludingAllDataInStream(AbstractIRODSMidLevelProtocol.java:322)
at org.irods.jargon.core.pub.DataAOHelper.processNormalPutTransfer(DataAOHelper.java:532)
at org.irods.jargon.core.pub.DataObjectAOImpl.putCommonProcessing(DataObjectAOImpl.java:641)
at org.irods.jargon.core.pub.DataObjectAOImpl.putLocalDataObjectToIRODSCommonProcessing(DataObjectAOImpl.java:551)
at org.irods.jargon.core.pub.DataObjectAOImpl.putLocalDataObjectToIRODS(DataObjectAOImpl.java:399)
at org.irods.jargon.core.pub.TransferOperationsHelper.processPutOfSingleFile(TransferOperationsHelper.java:803)
at org.irods.jargon.core.pub.DataTransferOperationsImpl.processPutAfterAnyConnectionRerouting(DataTransferOperationsImpl.java:984)
at org.irods.jargon.core.pub.DataTransferOperationsImpl.putOperation(DataTransferOperationsImpl.java:861)
at org.irods.jargon.core.pub.DataTransferOperationsImpl.putOperation(DataTransferOperationsImpl.java:1086)
at org.irods.jargon.core.pub.MountedCollectionAOImpl.createAnMSSOMountForWorkflow(MountedCollectionAOImpl.java:351)
at org.irods.jargon.core.pub.MountedCollectionAOImplForMSSOTest.testMountMSSOWorkflow(MountedCollectionAOImplForMSSOTest.java:86)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.runners.BlockJUnit4ClassRunner.runNotIgnored(BlockJUnit4ClassRunner.java:79)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:71)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:49)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.eclipse.jdt.internal.junit4.runner.JUnit4TestReference.run(JUnit4TestReference.java:50)
at org.eclipse.jdt.internal.junit.runner.TestExecution.run(TestExecution.java:38)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.runTests(RemoteTestRunner.java:467)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.runTests(RemoteTestRunner.java:683)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.run(RemoteTestRunner.java:390)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.main(RemoteTestRunner.java:197)
5890 [main] ERROR org.irods.jargon.core.pub.DataTransferOperationsImpl - exception in transfer
org.irods.jargon.core.exception.JargonException: error code received from iRODS:-815000
at org.irods.jargon.core.connection.IRODSErrorScanner.checkSpecificCodesAndThrowIfExceptionLocated(IRODSErrorScanner.java:211)
at org.irods.jargon.core.connection.IRODSErrorScanner.inspectAndThrowIfNeeded(IRODSErrorScanner.java:117)
at org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol.processMessageInfoLessThanZero(AbstractIRODSMidLevelProtocol.java:1136)
at org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol.readMessage(AbstractIRODSMidLevelProtocol.java:589)
at org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol.readMessage(AbstractIRODSMidLevelProtocol.java:555)
at org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol.irodsFunctionIncludingAllDataInStream(AbstractIRODSMidLevelProtocol.java:322)
at org.irods.jargon.core.pub.DataAOHelper.processNormalPutTransfer(DataAOHelper.java:532)
at org.irods.jargon.core.pub.DataObjectAOImpl.putCommonProcessing(DataObjectAOImpl.java:641)
at org.irods.jargon.core.pub.DataObjectAOImpl.putLocalDataObjectToIRODSCommonProcessing(DataObjectAOImpl.java:551)
at org.irods.jargon.core.pub.DataObjectAOImpl.putLocalDataObjectToIRODS(DataObjectAOImpl.java:399)
at org.irods.jargon.core.pub.TransferOperationsHelper.processPutOfSingleFile(TransferOperationsHelper.java:803)
at org.irods.jargon.core.pub.DataTransferOperationsImpl.processPutAfterAnyConnectionRerouting(DataTransferOperationsImpl.java:984)
at org.irods.jargon.core.pub.DataTransferOperationsImpl.putOperation(DataTransferOperationsImpl.java:861)
at org.irods.jargon.core.pub.DataTransferOperationsImpl.putOperation(DataTransferOperationsImpl.java:1086)
at org.irods.jargon.core.pub.MountedCollectionAOImpl.createAnMSSOMountForWorkflow(MountedCollectionAOImpl.java:351)
at org.irods.jargon.core.pub.MountedCollectionAOImplForMSSOTest.testMountMSSOWorkflow(MountedCollectionAOImplForMSSOTest.java:86)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.runners.BlockJUnit4ClassRunner.runNotIgnored(BlockJUnit4ClassRunner.java:79)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:71)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:49)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.eclipse.jdt.internal.junit4.runner.JUnit4TestReference.run(JUnit4TestReference.java:50)
at org.eclipse.jdt.internal.junit.runner.TestExecution.run(TestExecution.java:38)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.runTests(RemoteTestRunner.java:467)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.runTests(RemoteTestRunner.java:683)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.run(RemoteTestRunner.java:390)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.main(RemoteTestRunner.java:197)
5897 [main] WARN org.irods.jargon.core.pub.DataTransferOperationsImpl - exception will be re-thrown, as there is no status callback listener
5910 [main] INFO org.irods.jargon.core.connection.IRODSSession - closing all irods sessions
5910 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - closing connection
5910 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - shutting down, need to send disconnect to irods
5911 [main] INFO org.irods.jargon.core.connection.AbstractIRODSMidLevelProtocol - sending disconnect message
5912 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - shutting down connection: true
5912 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - is connected for : irods://test1.tempZone@localhost:1247/tempZone/home/test1/main/1394546808819
5913 [main] INFO org.irods.jargon.core.connection.IRODSBasicTCPConnection - now disconnected

@michael-conway michael-conway self-assigned this Mar 24, 2014
@michael-conway michael-conway added this to the Jargon 3.3.3 milestone Mar 24, 2014
@michael-conway michael-conway modified the milestone: consortium-compatability Jun 24, 2014
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