@DReichLab

David Reich Lab

  • ADNA-Tools

    This project is a collection of tools for bioinformatic processing of ancient DNA data at the Harvard Medical School Reich Lab.

    Java 1 Updated Dec 4, 2018

  • AdmixTools

    Tools test whether admixture occurred and more

    C 62 22 Updated Nov 16, 2018

  • EIG

    Eigen tools by Nick Patterson and Alkes Price lab

    C 74 32 Updated Aug 27, 2018

  • PMDtools

    Forked from pontussk/PMDtools

    Compute postmortem damage patterns and decontaminate ancient genomes

    Python 3 GPL-3.0 Updated Mar 7, 2018

  • cTools

    Tools for accessing SGDP lite data

    C 4 5 Updated Jan 31, 2018

  • adna

    Processing WGS aDNA data using the ReichLab protocol

    C 9 3 Updated Jul 25, 2017

  • MutationRateCode

    by Mark Lipson

    MATLAB 2 Updated Aug 20, 2015

  • XP-CLR

    XP-CLR (Chen et al. 2010) uses allele frequency differentiation at linked loci to detect selective sweeps.

    Updated Mar 16, 2015

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