David Reich Lab
Repositories
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AdmixTools
Tools test whether admixture occurred and more
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ADNA-Tools
This project is a collection of tools for bioinformatic processing of ancient DNA data at the Harvard Medical School Reich Lab.
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adna-workflow
Workflow for processing Illumina sequencing runs for ancient human DNA
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EIG
Eigen tools by Nick Patterson and Alkes Price lab
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cTools
Tools for accessing SGDP lite data
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adna
Processing WGS aDNA data using the ReichLab protocol
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PMDtools
Forked from pontussk/PMDtoolsCompute postmortem damage patterns and decontaminate ancient genomes
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MutationRateCode
by Mark Lipson
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XP-CLR
XP-CLR (Chen et al. 2010) uses allele frequency differentiation at linked loci to detect selective sweeps.
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