From 738f65e360aad6fd2c5df0390da81937179ffb68 Mon Sep 17 00:00:00 2001 From: Denis-Titov Date: Thu, 11 Apr 2024 22:02:27 -0700 Subject: [PATCH 1/2] fix GAPDH binding equations --- src/enzyme_binding.jl | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/src/enzyme_binding.jl b/src/enzyme_binding.jl index 567b14d..4ea8b67 100644 --- a/src/enzyme_binding.jl +++ b/src/enzyme_binding.jl @@ -265,7 +265,7 @@ function binding_GAPDH(metabs, params) metabs.NADH / params.GAPDH_K_i_NADH * ( 1 + metabs.GAP / params.GAPDH_K_GAP * (1 + metabs.Phosphate / params.GAPDH_K_i_Phosphate) + - metabs.BPG / (params.GAPDH_β_i_BPG * params.GAPDH_K_BPG) + params.GAPDH_β_i_BPG * metabs.BPG / (params.GAPDH_K_BPG) ) Z = (Z_a^4 + params.GAPDH_L * Z_i^4) GAP_bound = @@ -326,7 +326,7 @@ function binding_GAPDH(metabs, params) ( 1 + metabs.NAD / params.GAPDH_K_i_NAD + - metabs.NADH / (params.GAPDH_β_i_BPG * params.GAPDH_K_i_NADH) + mparams.GAPDH_β_i_BPG * etabs.NADH / (params.GAPDH_K_i_NADH) ) * (1 + metabs.Phosphate / params.GAPDH_K_i_Phosphate) * Z_i^3 @@ -347,7 +347,7 @@ function binding_GAPDH(metabs, params) ( 1 + metabs.GAP / params.GAPDH_K_GAP * (1 + metabs.Phosphate / params.GAPDH_K_i_Phosphate) + - metabs.BPG / (params.GAPDH_β_i_BPG * params.GAPDH_K_BPG) + params.GAPDH_β_i_BPG * metabs.BPG / (params.GAPDH_K_BPG) ) * Z_i^3 ) From 94e699aa4488638b982f1ccbeff362b71698c2d2 Mon Sep 17 00:00:00 2001 From: Denis-Titov Date: Thu, 11 Apr 2024 22:03:39 -0700 Subject: [PATCH 2/2] bump version --- Project.toml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/Project.toml b/Project.toml index 371e66f..20c4668 100644 --- a/Project.toml +++ b/Project.toml @@ -1,7 +1,7 @@ name = "Glycolysis" uuid = "1acb6d80-f93a-4117-912f-ae4c0dd090a6" authors = ["Denis-Titov and contributors"] -version = "0.7.2" +version = "0.7.3" [deps] LabelledArrays = "2ee39098-c373-598a-b85f-a56591580800"