Digital Slide Archive
- Atlanta, GA, USA
- https://digitalslidearchive.github.io/
- dagutman@gmail.com
Pinned repositories
Repositories
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digital_slide_archive
The official deployment of the Digital Slide Archive and HistomicsTK.
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HistomicsTK
A Python toolkit for pathology image analysis algorithms.
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HistomicsUI
A Girder plugin for pathology image annotations and analysis.
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CNNCellDetection
This repository contains adaptations of the state-of-the-art deep learning based object detection models for the detection of cell nuclei in histology images
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tifftools
Pure Python tools for reading and writing all TIFF IFDs, sub-IFDs, and tags.
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DSA-WSI-DeID
A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.
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tensorflow_reader
A whole-slide image reader for TensorFlow
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digitalslidearchive.info
Documentation for installing and maintaining the Digital Slide Archive, Girder, and HistomicsTK
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DigitalSlideArchive.github.io
This is a redirect to the main documentation
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base_docker_image
This a repository for generating the docker image to be used as a base image by the docker image of HistomicsTK
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dsa_girder_webix_base_viewer
This is a Webix Based Viewing application template for the DSA that uses Girder API
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ansible-role-vips
Ansible role to install VIPS image processing software
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ctk-cli
Forked from cdeepakroy/ctk-cliPython interface for inspecting and running CLI modules (as defined by CommonTK)
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DSA_Documentation
Documentation for DSA for ReadTheDocs