Skip to content
Documentation for installing and maintaining the Digital Slide Archive, Girder, and HistomicsTK
Branch: master
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Type Name Latest commit message Commit time
Failed to load latest commit information.
DSA_Girder_Installation
PythonAPIDocs
StudentSummerWork
VirtualFolderExamples
WorkingWithFiles
WorkingWithImages
metadata_generation
ExampleADRCDataManagement.md
InstallingNvidiaDocker.md
MetaDataManagement.md
README.md
putMetadataByWebix.md
renameFolderAndPostMetaDataExample.ipynb

README.md

digitalslidearchive.info

This contains documentation for installation and maintenance for the DSA, Girder and HistomicsTK

What is the Digital Slide Archive?

The CDSA was originally developed to support the visualization of large whole slide images for cancer. The DSA is the basic platform/system that supports data upload, permissions, etc.. So the CDSA is a specific instance of the DSA software. So the CDSA is a specific set of data (from the TCGA) that uses the DSA software to host/view images.... The same system can (and hopefully will!) be used for lots of supports.

The DSA Components

The DSA consists of two primary components, and I realize the semmantics get a bit confusing!

The DSA = Digital Slide Archive = Object Management and Slide Visualization Tools HistomicsTK is a set of (mostly) python based algorithms that support the analysis of WSI Images.

There are a lot of documentation we are still in the process of curating.. to get started with actually installing the Digital Slide Archive (DSA) using docker... start from here

You can’t perform that action at this time.