diff --git a/easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.3.0-2025a.yml b/easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.3.0-2025a.yml
index b72bc5059c..ca45d59ab3 100644
--- a/easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.3.0-2025a.yml
+++ b/easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.3.0-2025a.yml
@@ -4,3 +4,7 @@ easyconfigs:
   - elfutils-0.193-GCCcore-14.2.0.eb
   - scikit-bio-0.7.1.post1-foss-2025a.eb
   - BioPerl-1.7.8-GCCcore-14.2.0.eb
+  - IQ-TREE-3.1.2-gompi-2025a.eb:
+      options:
+        # see https://github.com/easybuilders/easybuild-easyconfigs/pull/25981
+        from-commit: df78eb85f1e5f2b42c1feba2e93f4dc822a02474