Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Show Lmod warning when ESPResSo v4.2.1 is loaded #560

Merged
merged 11 commits into from
May 28, 2024

Conversation

Neves-P
Copy link
Member

@Neves-P Neves-P commented May 6, 2024

This PR adds a Lmod warning that should be displayed when ESPResSo v4.2.2 is released and v4.2.1 is deprecated and removed from package managers.

We will not remove v4.2.1 from EESSI, however, we notify users that this version should not be used in production in most cases (e.g., reproducing old results) as v4.2.2 fixes the problem described in espressomd/espresso#4856.

Copy link

eessi-bot bot commented May 6, 2024

Instance eessi-bot-mc-aws is configured to build:

  • arch x86_64/generic for repo eessi-hpc.org-2023.06-compat
  • arch x86_64/generic for repo eessi-hpc.org-2023.06-software
  • arch x86_64/generic for repo eessi.io-2023.06-compat
  • arch x86_64/generic for repo eessi.io-2023.06-software
  • arch x86_64/intel/haswell for repo eessi-hpc.org-2023.06-compat
  • arch x86_64/intel/haswell for repo eessi-hpc.org-2023.06-software
  • arch x86_64/intel/haswell for repo eessi.io-2023.06-compat
  • arch x86_64/intel/haswell for repo eessi.io-2023.06-software
  • arch x86_64/intel/skylake_avx512 for repo eessi-hpc.org-2023.06-compat
  • arch x86_64/intel/skylake_avx512 for repo eessi-hpc.org-2023.06-software
  • arch x86_64/intel/skylake_avx512 for repo eessi.io-2023.06-compat
  • arch x86_64/intel/skylake_avx512 for repo eessi.io-2023.06-software
  • arch x86_64/amd/zen2 for repo eessi-hpc.org-2023.06-compat
  • arch x86_64/amd/zen2 for repo eessi-hpc.org-2023.06-software
  • arch x86_64/amd/zen2 for repo eessi.io-2023.06-compat
  • arch x86_64/amd/zen2 for repo eessi.io-2023.06-software
  • arch x86_64/amd/zen3 for repo eessi-hpc.org-2023.06-compat
  • arch x86_64/amd/zen3 for repo eessi-hpc.org-2023.06-software
  • arch x86_64/amd/zen3 for repo eessi.io-2023.06-compat
  • arch x86_64/amd/zen3 for repo eessi.io-2023.06-software
  • arch aarch64/generic for repo eessi-hpc.org-2023.06-compat
  • arch aarch64/generic for repo eessi-hpc.org-2023.06-software
  • arch aarch64/generic for repo eessi.io-2023.06-compat
  • arch aarch64/generic for repo eessi.io-2023.06-software
  • arch aarch64/neoverse_n1 for repo eessi-hpc.org-2023.06-compat
  • arch aarch64/neoverse_n1 for repo eessi-hpc.org-2023.06-software
  • arch aarch64/neoverse_n1 for repo eessi.io-2023.06-compat
  • arch aarch64/neoverse_n1 for repo eessi.io-2023.06-software
  • arch aarch64/neoverse_v1 for repo eessi-hpc.org-2023.06-compat
  • arch aarch64/neoverse_v1 for repo eessi-hpc.org-2023.06-software
  • arch aarch64/neoverse_v1 for repo eessi.io-2023.06-compat
  • arch aarch64/neoverse_v1 for repo eessi.io-2023.06-software

Copy link

eessi-bot bot commented May 6, 2024

Instance eessi-bot-mc-azure is configured to build:

  • arch x86_64/amd/zen4 for repo eessi-hpc.org-2023.06-compat
  • arch x86_64/amd/zen4 for repo eessi-hpc.org-2023.06-software
  • arch x86_64/amd/zen4 for repo eessi.io-2023.06-compat
  • arch x86_64/amd/zen4 for repo eessi.io-2023.06-software

@Neves-P
Copy link
Member Author

Neves-P commented May 6, 2024

bot: build repo:eessi.io-2023.06-software arch:aarch64/generic

Copy link

eessi-bot bot commented May 6, 2024

Updates by the bot instance eessi-bot-mc-aws (click for details)
  • received bot command build repo:eessi.io-2023.06-software arch:aarch64/generic from Neves-P

    • expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/generic
  • handling command build repository:eessi.io-2023.06-software architecture:aarch64/generic resulted in:

Copy link

eessi-bot bot commented May 6, 2024

Updates by the bot instance eessi-bot-mc-azure (click for details)
  • account Neves-P has NO permission to send commands to the bot

Copy link

eessi-bot bot commented May 6, 2024

New job on instance eessi-bot-mc-aws for architecture aarch64-generic for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.05/pr_560/10243

date job status comment
May 06 20:49:21 UTC 2024 submitted job id 10243 awaits release by job manager
May 06 20:50:22 UTC 2024 released job awaits launch by Slurm scheduler
May 06 20:54:24 UTC 2024 running job 10243 is running
May 06 21:07:36 UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-10243.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-generic-1715028859.tar.gzsize: 0 MiB (2602 bytes)
entries: 1
modules under 2023.06/software/linux/aarch64/generic/modules/all
no module files in tarball
software under 2023.06/software/linux/aarch64/generic/software
no software packages in tarball
other under 2023.06/software/linux/aarch64/generic
.lmod/SitePackage.lua
May 06 21:07:36 UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 10/10 test case(s) from 10 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-10243.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

@Neves-P Neves-P changed the title Espresso lmodwarn Show Lmod warning when ESPResSo v4.2.1 is loaded May 7, 2024
@Neves-P
Copy link
Member Author

Neves-P commented May 8, 2024

bot: build repo:eessi.io-2023.06-software arch:aarch64/generic

Copy link

eessi-bot bot commented May 8, 2024

Updates by the bot instance eessi-bot-mc-aws (click for details)
  • received bot command build repo:eessi.io-2023.06-software arch:aarch64/generic from Neves-P

    • expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/generic
  • handling command build repository:eessi.io-2023.06-software architecture:aarch64/generic resulted in:

Copy link

eessi-bot bot commented May 8, 2024

Updates by the bot instance eessi-bot-mc-azure (click for details)
  • account Neves-P has NO permission to send commands to the bot

Copy link

eessi-bot bot commented May 8, 2024

New job on instance eessi-bot-mc-aws for architecture aarch64-generic for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.05/pr_560/10359

date job status comment
May 08 14:04:50 UTC 2024 submitted job id 10359 awaits release by job manager
May 08 14:05:16 UTC 2024 released job awaits launch by Slurm scheduler
May 08 14:10:18 UTC 2024 running job 10359 is running
May 08 14:23:32 UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-10359.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-generic-1715177400.tar.gzsize: 0 MiB (3043 bytes)
entries: 1
modules under 2023.06/software/linux/aarch64/generic/modules/all
no module files in tarball
software under 2023.06/software/linux/aarch64/generic/software
no software packages in tarball
other under 2023.06/software/linux/aarch64/generic
.lmod/SitePackage.lua
May 08 14:23:32 UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 10/10 test case(s) from 10 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-10359.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

@Neves-P
Copy link
Member Author

Neves-P commented May 17, 2024

bot: build repo:eessi.io-2023.06-software arch:aarch64/generic

Copy link

eessi-bot bot commented May 17, 2024

Updates by the bot instance eessi-bot-mc-aws (click for details)
  • received bot command build repo:eessi.io-2023.06-software arch:aarch64/generic from Neves-P

    • expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/generic
  • handling command build repository:eessi.io-2023.06-software architecture:aarch64/generic resulted in:

Copy link

eessi-bot bot commented May 17, 2024

Updates by the bot instance eessi-bot-mc-azure (click for details)
  • account Neves-P has NO permission to send commands to the bot

Copy link

eessi-bot bot commented May 17, 2024

New job on instance eessi-bot-mc-aws for architecture aarch64-generic for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.05/pr_560/10944

date job status comment
May 17 18:16:48 UTC 2024 submitted job id 10944 awaits release by job manager
May 17 18:16:51 UTC 2024 released job awaits launch by Slurm scheduler
May 17 18:21:53 UTC 2024 running job 10944 is running
May 17 18:26:58 UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-10944.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-generic-1715970085.tar.gzsize: 0 MiB (3045 bytes)
entries: 1
modules under 2023.06/software/linux/aarch64/generic/modules/all
no module files in tarball
software under 2023.06/software/linux/aarch64/generic/software
no software packages in tarball
other under 2023.06/software/linux/aarch64/generic
.lmod/SitePackage.lua
May 17 18:26:58 UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 10/10 test case(s) from 10 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-10944.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

ESPResSo Lmod warning <= v4.2.1 points users to v4.2.2 release notes instead of only one of the bugs fixed
@Neves-P
Copy link
Member Author

Neves-P commented May 23, 2024

bot: build repo:eessi.io-2023.06-software arch:aarch64/generic

Copy link

eessi-bot bot commented May 23, 2024

Updates by the bot instance eessi-bot-mc-aws (click for details)
  • received bot command build repo:eessi.io-2023.06-software arch:aarch64/generic from Neves-P

    • expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/generic
  • handling command build repository:eessi.io-2023.06-software architecture:aarch64/generic resulted in:

Copy link

eessi-bot bot commented May 23, 2024

Updates by the bot instance eessi-bot-mc-azure (click for details)
  • account Neves-P has NO permission to send commands to the bot

Copy link

eessi-bot bot commented May 23, 2024

New job on instance eessi-bot-mc-aws for architecture aarch64-generic for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.05/pr_560/11289

date job status comment
May 23 12:14:53 UTC 2024 submitted job id 11289 awaits release by job manager
May 23 12:15:06 UTC 2024 released job awaits launch by Slurm scheduler
May 23 12:20:13 UTC 2024 running job 11289 is running
May 23 12:26:25 UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-11289.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-generic-1716466821.tar.gzsize: 0 MiB (3047 bytes)
entries: 1
modules under 2023.06/software/linux/aarch64/generic/modules/all
no module files in tarball
software under 2023.06/software/linux/aarch64/generic/software
no software packages in tarball
other under 2023.06/software/linux/aarch64/generic
.lmod/SitePackage.lua
May 23 12:26:25 UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 10/10 test case(s) from 10 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-11289.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

@Neves-P
Copy link
Member Author

Neves-P commented May 27, 2024

After doing:

cd /project/def-users/SHARED/jobs/2024.05/pr_560/11289
./bot/inspect.sh -r previous_tmp/test_step/eessi.io-2023.06-software-1716467140.tgz

And then:

pedro@login1 /project/def-users/SHARED/jobs/2024.05/pr_560/11289 $ ml ESPResSo/4.2.1-foss-2023a
Lmod Warning:
ESPReSso v4.2.1 has known issues and has been deprecated. Prefer versions >= 4.2.2 which include important bugfixes.
For details see https://github.com/espressomd/espresso/releases/tag/4.2.2
Use version 4.2.1 at your own risk!
n
While processing the following module(s):
    Module fullname            Module Filename
    ---------------            ---------------
    ESPResSo/4.2.1-foss-2023a  /cvmfs/software.eessi.io/versions/2023.06/software/linux/aarch64/generic/modules/all/ESPResSo/4.2.1-foss-2023a.lua

There is a typo that adds a single line with "n", fixing that now.

@Neves-P
Copy link
Member Author

Neves-P commented May 27, 2024

bot: build repo:eessi.io-2023.06-software arch:aarch64/generic

Copy link

eessi-bot bot commented May 27, 2024

Updates by the bot instance eessi-bot-mc-aws (click for details)
  • received bot command build repo:eessi.io-2023.06-software arch:aarch64/generic from Neves-P

    • expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/generic
  • handling command build repository:eessi.io-2023.06-software architecture:aarch64/generic resulted in:

Copy link

eessi-bot bot commented May 27, 2024

Updates by the bot instance eessi-bot-mc-azure (click for details)
  • account Neves-P has NO permission to send commands to the bot

Copy link

eessi-bot bot commented May 27, 2024

New job on instance eessi-bot-mc-aws for architecture aarch64-generic for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.05/pr_560/11551

date job status comment
May 27 07:50:01 UTC 2024 submitted job id 11551 awaits release by job manager
May 27 07:50:13 UTC 2024 released job awaits launch by Slurm scheduler
May 27 07:55:15 UTC 2024 running job 11551 is running
May 27 08:01:21 UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-11551.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-generic-1716796505.tar.gzsize: 0 MiB (3046 bytes)
entries: 1
modules under 2023.06/software/linux/aarch64/generic/modules/all
no module files in tarball
software under 2023.06/software/linux/aarch64/generic/software
no software packages in tarball
other under 2023.06/software/linux/aarch64/generic
.lmod/SitePackage.lua
May 27 08:01:21 UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 10/10 test case(s) from 10 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-11551.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

@Neves-P
Copy link
Member Author

Neves-P commented May 27, 2024

bot: build repo:eessi.io-2023.06-software arch:aarch64/neoverse_n1
bot: build repo:eessi.io-2023.06-software arch:aarch64/neoverse_v1
bot: build repo:eessi.io-2023.06-software arch:aarch64/generic
bot: build repo:eessi.io-2023.06-software arch:x86_64/generic
bot: build repo:eessi.io-2023.06-software arch:x86_64/amd/zen2
bot: build repo:eessi.io-2023.06-software arch:x86_64/amd/zen3
bot: build repo:eessi.io-2023.06-software arch:x86_64/intel/haswell
bot: build repo:eessi.io-2023.06-software arch:x86_64/intel/skylake_avx512

Copy link

eessi-bot bot commented May 27, 2024

Updates by the bot instance eessi-bot-mc-aws (click for details)
  • received bot command build repo:eessi.io-2023.06-software arch:aarch64/neoverse_n1 from Neves-P

    • expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/neoverse_n1
  • received bot command build repo:eessi.io-2023.06-software arch:aarch64/neoverse_v1 from Neves-P

    • expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/neoverse_v1
  • received bot command build repo:eessi.io-2023.06-software arch:aarch64/generic from Neves-P

    • expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/generic
  • received bot command build repo:eessi.io-2023.06-software arch:x86_64/generic from Neves-P

    • expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/generic
  • received bot command build repo:eessi.io-2023.06-software arch:x86_64/amd/zen2 from Neves-P

    • expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/amd/zen2
  • received bot command build repo:eessi.io-2023.06-software arch:x86_64/amd/zen3 from Neves-P

    • expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/amd/zen3
  • received bot command build repo:eessi.io-2023.06-software arch:x86_64/intel/haswell from Neves-P

    • expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/intel/haswell
  • received bot command build repo:eessi.io-2023.06-software arch:x86_64/intel/skylake_avx512 from Neves-P

    • expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/intel/skylake_avx512
  • handling command build repository:eessi.io-2023.06-software architecture:aarch64/neoverse_n1 resulted in:

  • handling command build repository:eessi.io-2023.06-software architecture:aarch64/neoverse_v1 resulted in:

  • handling command build repository:eessi.io-2023.06-software architecture:aarch64/generic resulted in:

  • handling command build repository:eessi.io-2023.06-software architecture:x86_64/generic resulted in:

  • handling command build repository:eessi.io-2023.06-software architecture:x86_64/amd/zen2 resulted in:

  • handling command build repository:eessi.io-2023.06-software architecture:x86_64/amd/zen3 resulted in:

  • handling command build repository:eessi.io-2023.06-software architecture:x86_64/intel/haswell resulted in:

  • handling command build repository:eessi.io-2023.06-software architecture:x86_64/intel/skylake_avx512 resulted in:

Copy link

eessi-bot bot commented May 27, 2024

Updates by the bot instance eessi-bot-mc-azure (click for details)
  • account Neves-P has NO permission to send commands to the bot

Copy link

eessi-bot bot commented May 27, 2024

New job on instance eessi-bot-mc-aws for architecture aarch64-neoverse_n1 for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.05/pr_560/11552

date job status comment
May 27 08:33:33 UTC 2024 submitted job id 11552 awaits release by job manager
May 27 08:34:29 UTC 2024 released job awaits launch by Slurm scheduler
May 27 08:38:57 UTC 2024 running job 11552 is running
May 27 08:44:36 UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-11552.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-neoverse_n1-1716799145.tar.gzsize: 0 MiB (3046 bytes)
entries: 1
modules under 2023.06/software/linux/aarch64/neoverse_n1/modules/all
no module files in tarball
software under 2023.06/software/linux/aarch64/neoverse_n1/software
no software packages in tarball
other under 2023.06/software/linux/aarch64/neoverse_n1
.lmod/SitePackage.lua
May 27 08:44:36 UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 10/10 test case(s) from 10 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-11552.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 28 12:02:09 UTC 2024 uploaded transfer of eessi-2023.06-software-linux-aarch64-neoverse_n1-1716799145.tar.gz to S3 bucket succeeded

Copy link

eessi-bot bot commented May 27, 2024

New job on instance eessi-bot-mc-aws for architecture aarch64-neoverse_v1 for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.05/pr_560/11553

date job status comment
May 27 08:33:38 UTC 2024 submitted job id 11553 awaits release by job manager
May 27 08:34:30 UTC 2024 released job awaits launch by Slurm scheduler
May 27 08:38:59 UTC 2024 running job 11553 is running
May 27 08:43:33 UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-11553.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-neoverse_v1-1716799144.tar.gzsize: 0 MiB (3046 bytes)
entries: 1
modules under 2023.06/software/linux/aarch64/neoverse_v1/modules/all
no module files in tarball
software under 2023.06/software/linux/aarch64/neoverse_v1/software
no software packages in tarball
other under 2023.06/software/linux/aarch64/neoverse_v1
.lmod/SitePackage.lua
May 27 08:43:33 UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 10/10 test case(s) from 10 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-11553.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 28 12:02:28 UTC 2024 uploaded transfer of eessi-2023.06-software-linux-aarch64-neoverse_v1-1716799144.tar.gz to S3 bucket succeeded

Copy link

eessi-bot bot commented May 27, 2024

New job on instance eessi-bot-mc-aws for architecture aarch64-generic for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.05/pr_560/11554

date job status comment
May 27 08:33:42 UTC 2024 submitted job id 11554 awaits release by job manager
May 27 08:34:26 UTC 2024 released job awaits launch by Slurm scheduler
May 27 08:35:43 UTC 2024 running job 11554 is running
May 27 08:41:19 UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-11554.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-generic-1716798882.tar.gzsize: 0 MiB (3043 bytes)
entries: 1
modules under 2023.06/software/linux/aarch64/generic/modules/all
no module files in tarball
software under 2023.06/software/linux/aarch64/generic/software
no software packages in tarball
other under 2023.06/software/linux/aarch64/generic
.lmod/SitePackage.lua
May 27 08:41:19 UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 10/10 test case(s) from 10 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-11554.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 28 12:01:49 UTC 2024 uploaded transfer of eessi-2023.06-software-linux-aarch64-generic-1716798882.tar.gz to S3 bucket succeeded

Copy link

eessi-bot bot commented May 27, 2024

New job on instance eessi-bot-mc-aws for architecture x86_64-generic for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.05/pr_560/11555

date job status comment
May 27 08:33:46 UTC 2024 submitted job id 11555 awaits release by job manager
May 27 08:34:37 UTC 2024 released job awaits launch by Slurm scheduler
May 27 08:35:47 UTC 2024 running job 11555 is running
May 27 08:41:21 UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-11555.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-generic-1716798887.tar.gzsize: 0 MiB (3037 bytes)
entries: 1
modules under 2023.06/software/linux/x86_64/generic/modules/all
no module files in tarball
software under 2023.06/software/linux/x86_64/generic/software
no software packages in tarball
other under 2023.06/software/linux/x86_64/generic
.lmod/SitePackage.lua
May 27 08:41:21 UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 10/10 test case(s) from 10 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-11555.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 28 12:02:49 UTC 2024 uploaded transfer of eessi-2023.06-software-linux-x86_64-generic-1716798887.tar.gz to S3 bucket succeeded

Copy link

eessi-bot bot commented May 27, 2024

New job on instance eessi-bot-mc-aws for architecture x86_64-amd-zen2 for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.05/pr_560/11556

date job status comment
May 27 08:33:50 UTC 2024 submitted job id 11556 awaits release by job manager
May 27 08:34:33 UTC 2024 released job awaits launch by Slurm scheduler
May 27 08:35:45 UTC 2024 running job 11556 is running
May 27 08:40:11 UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-11556.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-amd-zen2-1716798884.tar.gzsize: 0 MiB (3033 bytes)
entries: 1
modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all
no module files in tarball
software under 2023.06/software/linux/x86_64/amd/zen2/software
no software packages in tarball
other under 2023.06/software/linux/x86_64/amd/zen2
.lmod/SitePackage.lua
May 27 08:40:11 UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 10/10 test case(s) from 10 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-11556.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 28 12:03:08 UTC 2024 uploaded transfer of eessi-2023.06-software-linux-x86_64-amd-zen2-1716798884.tar.gz to S3 bucket succeeded

Copy link

eessi-bot bot commented May 27, 2024

New job on instance eessi-bot-mc-aws for architecture x86_64-amd-zen3 for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.05/pr_560/11557

date job status comment
May 27 08:33:53 UTC 2024 submitted job id 11557 awaits release by job manager
May 27 08:34:35 UTC 2024 released job awaits launch by Slurm scheduler
May 27 08:40:07 UTC 2024 running job 11557 is running
May 27 08:44:38 UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-11557.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-amd-zen3-1716799203.tar.gzsize: 0 MiB (3036 bytes)
entries: 1
modules under 2023.06/software/linux/x86_64/amd/zen3/modules/all
no module files in tarball
software under 2023.06/software/linux/x86_64/amd/zen3/software
no software packages in tarball
other under 2023.06/software/linux/x86_64/amd/zen3
.lmod/SitePackage.lua
May 27 08:44:38 UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 10/10 test case(s) from 10 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-11557.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 28 12:03:28 UTC 2024 uploaded transfer of eessi-2023.06-software-linux-x86_64-amd-zen3-1716799203.tar.gz to S3 bucket succeeded

@Neves-P Neves-P marked this pull request as ready for review May 27, 2024 08:33
Copy link

eessi-bot bot commented May 27, 2024

New job on instance eessi-bot-mc-aws for architecture x86_64-intel-haswell for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.05/pr_560/11558

date job status comment
May 27 08:33:57 UTC 2024 submitted job id 11558 awaits release by job manager
May 27 08:34:39 UTC 2024 released job awaits launch by Slurm scheduler
May 27 08:40:10 UTC 2024 running job 11558 is running
May 27 08:45:41 UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-11558.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-haswell-1716799206.tar.gzsize: 0 MiB (3040 bytes)
entries: 1
modules under 2023.06/software/linux/x86_64/intel/haswell/modules/all
no module files in tarball
software under 2023.06/software/linux/x86_64/intel/haswell/software
no software packages in tarball
other under 2023.06/software/linux/x86_64/intel/haswell
.lmod/SitePackage.lua
May 27 08:45:41 UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 10/10 test case(s) from 10 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-11558.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 28 12:03:48 UTC 2024 uploaded transfer of eessi-2023.06-software-linux-x86_64-intel-haswell-1716799206.tar.gz to S3 bucket succeeded

Copy link

eessi-bot bot commented May 27, 2024

New job on instance eessi-bot-mc-aws for architecture x86_64-intel-skylake_avx512 for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.05/pr_560/11559

date job status comment
May 27 08:34:01 UTC 2024 submitted job id 11559 awaits release by job manager
May 27 08:34:41 UTC 2024 released job awaits launch by Slurm scheduler
May 27 08:41:18 UTC 2024 running job 11559 is running
May 27 08:44:39 UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-11559.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1716799228.tar.gzsize: 0 MiB (3048 bytes)
entries: 1
modules under 2023.06/software/linux/x86_64/intel/skylake_avx512/modules/all
no module files in tarball
software under 2023.06/software/linux/x86_64/intel/skylake_avx512/software
no software packages in tarball
other under 2023.06/software/linux/x86_64/intel/skylake_avx512
.lmod/SitePackage.lua
May 27 08:44:39 UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 10/10 test case(s) from 10 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-11559.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 28 12:04:07 UTC 2024 uploaded transfer of eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1716799228.tar.gz to S3 bucket succeeded

@Neves-P Neves-P requested a review from ocaisa May 27, 2024 08:46
@Neves-P Neves-P added the 2023.06-software.eessi.io 2023.06 version of software.eessi.io label May 27, 2024
Copy link
Member

@ocaisa ocaisa left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Seems to work as advertised

alanc@~/EESSI/software-layer(override_lmod_gpu_check)$ module purge
alanc@~/EESSI/software-layer(override_lmod_gpu_check)$ module load ESPResSo
Lmod Warning: 
ESPResSo v4.2.1 has known issues and has been deprecated. Prefer versions >= 4.2.2 which include important bugfixes.
For details see https://github.com/espressomd/espresso/releases/tag/4.2.2
Use version 4.2.1 at your own risk!

While processing the following module(s):
    Module fullname            Module Filename
    ---------------            ---------------
    ESPResSo/4.2.1-foss-2023a  /cvmfs/software.eessi.io/versions/2023.06/software/linux/x86_64/generic/modules/all/ESPResSo/4.2.1-foss-2023a.lua

alanc@~/EESSI/software-layer(override_lmod_gpu_check)$ module list

Currently Loaded Modules:
  1) GCCcore/12.3.0                    17) gompi/2023a                                33) lz4/1.9.4-GCCcore-12.3.0           49) LLVM/16.0.6-GCCcore-12.3.0
  2) GCC/12.3.0                        18) FFTW.MPI/3.3.10-gompi-2023a                34) zstd/1.5.5-GCCcore-12.3.0          50) Mesa/23.1.4-GCCcore-12.3.0
  3) numactl/2.0.16-GCCcore-12.3.0     19) ScaLAPACK/2.2.0-gompi-2023a-fb             35) ICU/73.2-GCCcore-12.3.0            51) GSL/2.7-GCC-12.3.0
  4) libxml2/2.11.4-GCCcore-12.3.0     20) foss/2023a                                 36) Boost.MPI/1.82.0-gompi-2023a       52) OpenPGM/5.2.122-GCCcore-12.3.0
  5) libpciaccess/0.17-GCCcore-12.3.0  21) Tcl/8.6.13-GCCcore-12.3.0                  37) Szip/2.1.1-GCCcore-12.3.0          53) libsodium/1.0.18-GCCcore-12.3.0
  6) hwloc/2.9.1-GCCcore-12.3.0        22) SQLite/3.42.0-GCCcore-12.3.0               38) HDF5/1.14.0-gompi-2023a            54) ZeroMQ/4.3.4-GCCcore-12.3.0
  7) OpenSSL/1.1                       23) libffi/3.4.4-GCCcore-12.3.0                39) expat/2.5.0-GCCcore-12.3.0         55) libxslt/1.1.38-GCCcore-12.3.0
  8) libevent/2.1.12-GCCcore-12.3.0    24) Python/3.11.3-GCCcore-12.3.0               40) libpng/1.6.39-GCCcore-12.3.0       56) lxml/4.9.2-GCCcore-12.3.0
  9) UCX/1.14.1-GCCcore-12.3.0         25) gfbf/2023a                                 41) Brotli/1.0.9-GCCcore-12.3.0        57) hatchling/1.18.0-GCCcore-12.3.0
 10) libfabric/1.18.0-GCCcore-12.3.0   26) cffi/1.15.1-GCCcore-12.3.0                 42) freetype/2.13.0-GCCcore-12.3.0     58) BeautifulSoup/4.12.2-GCCcore-12.3.0
 11) PMIx/4.2.4-GCCcore-12.3.0         27) cryptography/41.0.1-GCCcore-12.3.0         43) fontconfig/2.14.2-GCCcore-12.3.0   59) IPython/8.14.0-GCCcore-12.3.0
 12) UCC/1.2.0-GCCcore-12.3.0          28) virtualenv/20.23.1-GCCcore-12.3.0          44) xorg-macros/1.20.0-GCCcore-12.3.0  60) typing-extensions/4.9.0-GCCcore-12.3.0
 13) OpenMPI/4.1.5-GCC-12.3.0          29) Python-bundle-PyPI/2023.06-GCCcore-12.3.0  45) X11/20230603-GCCcore-12.3.0        61) Pint/0.23-GCCcore-12.3.0
 14) OpenBLAS/0.3.23-GCC-12.3.0        30) pybind11/2.11.1-GCCcore-12.3.0             46) libdrm/2.4.115-GCCcore-12.3.0      62) ESPResSo/4.2.1-foss-2023a
 15) FlexiBLAS/3.3.1-GCC-12.3.0        31) SciPy-bundle/2023.07-gfbf-2023a            47) libglvnd/1.6.0-GCCcore-12.3.0
 16) FFTW/3.3.10-GCC-12.3.0            32) gzip/1.12-GCCcore-12.3.0                   48) libunwind/1.6.2-GCCcore-12.3.0

@ocaisa ocaisa added the bot:deploy Ask bot to deploy missing software installations to EESSI label May 28, 2024
@ocaisa
Copy link
Member

ocaisa commented May 28, 2024

All staging PRs merged

@ocaisa ocaisa merged commit 7ec100e into EESSI:2023.06-software.eessi.io May 28, 2024
36 checks passed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
2023.06-software.eessi.io 2023.06 version of software.eessi.io bot:deploy Ask bot to deploy missing software installations to EESSI
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants