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This product is a workflow and an example of how data from EMODnet Biology can be verified, checked and used for time series analyses
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README.md

Product by Peter M.J. Herman

EMODnet-Biology-Zooplankton-analysis-Villefranche

This product is a workflow and an example of how data from EMODnet Biology can be verified, checked and used for time series analyses

This is the Github repository of the EMODnet Biology product described here:

http://emodnet-biology.eu/long-term-zooplankton-time-series-analysis-form-villefranche-western-mediteeranean

Data Series

We selected all zooplankton data from the Villefranche permanent zooplankton station from EMODNET.

Description of datasets:

Dataset type EMODnet Biology link
surface observations http://www.emodnet-biology.eu/data-catalog?module=dataset&dasid=5924
Juday-Bogorov net http://www.emodnet-biology.eu/data-catalog?module=dataset&dasid=5918
Juday-Bogorov net http://www.emodnet-biology.eu/data-catalog?module=dataset&dasid=5925
Regent net http://www.emodnet-biology.eu/data-catalog?module=dataset&dasid=5923

Link to download toolbox: http://www.emodnet-biology.eu/toolbox/en/download/selection/15c07e9de85683

Download the occurrences and the measurements of facts!

Full analysis and code

pdf: https://github.com/EMODnet/EMODnet-Biology-Zooplankton-analysis-Villefranche/blob/master/prepdata.pdf

Word: https://github.com/EMODnet/EMODnet-Biology-Zooplankton-analysis-Villefranche/blob/master/prepdata.docx

R markdown: https://github.com/EMODnet/EMODnet-Biology-Zooplankton-analysis-Villefranche/blob/master/prepdata.Rmd

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