From 9a4f1701ac6d64c3647051e151a8cb0ae181e914 Mon Sep 17 00:00:00 2001 From: tdreszer Date: Tue, 1 Nov 2016 19:02:35 +0000 Subject: [PATCH] Assay parameter was not being set during launch. Fixed. --- dnanexus/rampage/rampageLaunch.py | 6 ++---- 1 file changed, 2 insertions(+), 4 deletions(-) diff --git a/dnanexus/rampage/rampageLaunch.py b/dnanexus/rampage/rampageLaunch.py index 1bbbe21..b7ec7c9 100755 --- a/dnanexus/rampage/rampageLaunch.py +++ b/dnanexus/rampage/rampageLaunch.py @@ -43,8 +43,7 @@ class RampageLaunch(Launch): "STEPS": { "rampage-align-pe": { "app": "rampage-align-pe", - # lrna_221 no assay "params": { "library_id": "library_id", "assay_type": "assay_type", "nthreads": "nthreads" }, - "params": { "library_id": "library_id", "nthreads": "nthreads" }, + "params": { "library_id": "library_id", "assay_type": "assay_type", "nthreads": "nthreads" }, "inputs": { "reads1": "reads1", "reads2": "reads2", "star_index": "star_index" }, @@ -63,8 +62,7 @@ class RampageLaunch(Launch): }, "rampage-peaks": { "app": "rampage-peaks", - # lrna_221 no assay "params": { "assay_type": "assay_type", "nthreads": "nthreads" }, - "params": { "nthreads": "nthreads" }, + "params": { "assay_type": "assay_type", "nthreads": "nthreads" }, "inputs": { "control_bam": "control_bam", "gene_annotation": "gene_annotation", "chrom_sizes": "chrom_sizes",