@Ecogenomics

Australian Centre for Ecogenomics

  • Python Updated Apr 28, 2017
  • GNU Guix package definitions for ACE or otherwise

    Scheme 1 1 Updated Apr 8, 2017
  • Python Updated Mar 29, 2017
  • Script for downloading data from ACE Sequencing

    Python Updated Feb 2, 2017
  • Australian Centre for Ecogenomics' genome tree database: Taxonomically annotated trees from HMMs and BLAST

    Python 2 3 Updated Dec 21, 2016
  • Python Updated Nov 29, 2016
  • Download project fastq files from BaseSpace

    Python 1 Updated Oct 10, 2016
  • Metagenomics-focused BAM file manipulation

    C 8 6 Updated Sep 9, 2016
  • Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes

    Python 33 11 Updated Sep 3, 2016
  • Metagenomic binning suite

    Python 11 7 Updated Apr 26, 2016
  • Python 3 Updated Oct 29, 2015
  • pfam_scan meets hmmsearch.

    Perl Updated Sep 17, 2015
  • scaffoldm

    Python 1 1 Updated May 21, 2015
  • APP

    Forked from minillinim/APP

    Ace Pyrotag Pipeline - wrapper for QIIME and R - interfaces with PyroDB

    Perl 1 2 Updated Apr 4, 2014
  • Feed the tree...

    Python 1 1 Updated Mar 11, 2013
  • create a rough scaffold using ion torrent MP reads

    Perl 6 Updated Dec 11, 2012
  • Feel the Franken

    Python 1 Updated Oct 11, 2012
  • Microbial annotation pipeline - in progress

    Perl 3 4 Updated Aug 1, 2012
  • Join a taxonomy to the greengenes database

    Perl 1 1 Updated May 3, 2012
  • A collection of scripts written by ACE members

    Shell 1 Updated Apr 12, 2012
  • sequence manipulation scripts that are actually useful

    Perl 1 8 Updated Apr 12, 2012
  • Perl program for normalising ecological data tables

    Perl 1 2 Updated Jan 12, 2012