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impl_sse
Makefile.in
Rfam.12.1.claninfo
alphabet.c
bandcyk-montecarlo-test.c
bandcyk-truncation-test.c
cm.c
cm_alidisplay.c
cm_alndata.c
cm_dispatch.h
cm_dpalign.c
cm_dpalign_trunc.c
cm_dpsearch.c
cm_dpsearch_trunc.c
cm_dpsmall.c
cm_file.c
cm_modelconfig.c
cm_modelmaker.c
cm_mx.c
cm_p7_band.c
cm_p7_domaindef.c
cm_p7_modelconfig_trunc.c
cm_p7_modelmaker.c
cm_parsetree.c
cm_pipeline.c
cm_qdband.c
cm_submodel.c
cm_tophits.c
cm_trunc.c
cmalign.c
cmbuild.c
cmcalibrate.c
cmconvert.c
cmemit.c
cmfetch.c
cmpress.c
cmscan.c
cmsearch.c
cmsim.c
cmstat.c
config.h.in
cp9-test.c
cp9.c
cp9_dp.c
cp9_modelmaker.c
cp9_mx.c
cp9_trace.c
default.prior
display.c
errors.c
eweight.c
hmmband.c
hmmband.h
infernal.h
itest_brute.c
logsum.c
mpisupport.c
nearzero.prior
plus1.prior
prior.c
prior.h
rna.null
rnamat.c
rnamat.h
sa-Makefile.in
stats.c
stats.h
sub_cm-test.c
trcyk.c
truncyk.c
truncyk_check.c
v056-to-v102-default.prior