ImportError: /usr/local/lib/python3.7/dist-packages/cv2/cv2.cpython-37m-arm-linux-gnueabihf.so: undefined symbol: __atomic_fetch_add_8 #67

happy-little-zhang · 2019-11-20T04:14:32Z

Raspberry 4
python 3.7
tensorflow 2.0
i follow your guidence , and this issues happended at last ,

how should i do ?

mentianyi · 2019-11-21T05:38:26Z

rp3b+,same error.

saifsmailbox98 · 2019-11-21T18:26:39Z

Same error using Raspbian Buster

saifsmailbox98 · 2019-11-21T18:52:19Z

Tried this workaround:

$ LD_PRELOAD=/usr/lib/arm-linux-gnueabihf/libatomic.so.1.2.0 python3 Object_detection_picamera.py  --usbcam

Getting a new error now:

Traceback (most recent call last):
  File "Object_detection_picamera.py", line 27, in <module>
    import tensorflow as tf
ModuleNotFoundError: No module named 'tensorflow'

Not sure if they are relevant.

Edit: Not relevant. The workaround should work.

mentianyi · 2019-11-22T08:56:20Z

No help..

saifsmailbox98 · 2019-11-22T17:35:35Z

Getting the same error?

Zach-OP · 2019-11-22T20:01:17Z

I'm seeing this as well.

Zach-OP · 2019-11-22T20:20:50Z

Hey, this is because the latest version of openCV doesn't work with RPi. Instead of pip3 install opencv-python try pip3 install opencv-python==3.4.6.27
You will need to uninstall the latest version first. pip3 uninstall opencv-python

happy-little-zhang · 2019-11-24T07:32:03Z

i used another way to solve this issue yesterday, but it's not convenient
i first install opencv follow other guidence
https://www.pyimagesearch.com/2019/09/16/install-opencv-4-on-raspberry-pi-4-and-raspbian buster/ ,
then i skep the step of installing opencv in this guidence .
the result is i need to execute some extra code everytime i run the "Object_detection_picamera.py", they are :

sudo find / -type f -name ‘atom.so*’
LD_PRELOAD=/usr/lib/arm-linux-gnueabihf/libatomic.so.1.2.0 python3 Object_detection_picamera.py

happy-little-zhang · 2019-11-24T07:36:38Z

i tried your way today , and it did works .
thank you for taking the time to solve this issue @Zach-OP

jlbs86 · 2019-12-02T06:35:07Z

thank you so much Zach-Op

ueray · 2019-12-18T09:20:49Z

When i try this, i get the error ''Could not install packages due to an EnvironmentError: 404 Client Error: Not found for url: https://pypi.org/simple/opencv-pyhton/''

Do you have any idea to achieve this problem?

Pupan-cpe · 2019-12-25T17:16:54Z

NICE !!!

insung3511 · 2020-01-01T11:07:38Z

i have same error.. but is not helped. i try this solution and this. but also it doesnt work.. anybody plz help me 😭

deysarkarswarup · 2020-01-08T17:09:55Z

it did work with previous versions of opencv.. thanks

andromeda1998 · 2020-01-27T05:05:55Z

Thank you so much! Worked like charm!

vietanha74 · 2020-02-03T14:33:31Z

Thanks you so much @Zach-OP It really useful !!!

Riverlox12 · 2020-02-09T11:53:12Z

2020-02-09 05:51:42.552137: E tensorflow/core/platform/hadoop/hadoop_file_system.cc:132] HadoopFileSystem load error: libhdfs.so: cannot open shared object file: No such file or directory
mmal: mmal_vc_port_enable: failed to enable port vc.null_sink:in:0(OPQV): ENOSPC
mmal: mmal_port_enable: failed to enable connected port (vc.null_sink:in:0(OPQV))0x2948490 (ENOSPC)
mmal: mmal_connection_enable: output port couldn't be enabled
Traceback (most recent call last):
File "Object_detection_picamera.py", line 124, in
camera = PiCamera()
File "/usr/lib/python3/dist-packages/picamera/camera.py", line 433, in init
self._init_preview()
File "/usr/lib/python3/dist-packages/picamera/camera.py", line 513, in _init_preview
self, self._camera.outputs[self.CAMERA_PREVIEW_PORT])
File "/usr/lib/python3/dist-packages/picamera/renderers.py", line 558, in init
self.renderer.inputs[0].connect(source).enable()
File "/usr/lib/python3/dist-packages/picamera/mmalobj.py", line 2212, in enable
prefix="Failed to enable connection")
File "/usr/lib/python3/dist-packages/picamera/exc.py", line 184, in mmal_check
raise PiCameraMMALError(status, prefix)
picamera.exc.PiCameraMMALError: Failed to enable connection: Out of resources

modarm-e · 2020-02-16T07:16:44Z

Thank you sooooooo much

gdoise · 2020-02-20T10:09:16Z

It worked for me on RPI 3 B. It uninstalled my opencv_python-4.1.1.26 now it's ok with opencv-python==3.4.6.27.
Thanks a lot !

svsadafule · 2020-02-27T04:30:52Z

Use OpenCV contrib with the right version.

pip install opencv-contrib-python==4.1.0.25

bharath-velisala · 2020-02-27T18:39:19Z

i excecuted the same python 3.4.6.27 was installed but againg showing the same error

Riverlox12 · 2020-02-28T00:25:48Z

Okay thank you very much! Have a great day!

…

On Sun, Feb 16, 2020, 1:16 AM modarm-e ***@***.***> wrote: Hey, this is because the latest version of openCV doesn't work with RPi. Instead of pip3 install opencv-python try pip3 install opencv-python==3.4.6.27 You will need to uninstall the latest version first. pip3 uninstall opencv-python Thank you sooooooo much — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#67?email_source=notifications&email_token=ANXCQKELI5E4DJX4YB2YJ6DRDDR53A5CNFSM4JPNARM2YY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOEL37TKI#issuecomment-586676649>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ANXCQKDEJXGAVBPC4243DL3RDDR53ANCNFSM4JPNARMQ> .

Edwiinrtz · 2020-03-07T06:13:01Z

it works well for me thanks

harshbhatt99 · 2020-03-27T09:30:50Z

Did you solve this? I have same issue

Martink-NZ · 2020-04-04T03:45:13Z

I tried Zac's approach to uninstall and then install OpenCV. I tried using LD_PRELOAD. I tried using VIRTUALWRAPPER_PYTHON. I tried mkvirtualenv cv2. None of them worked.
I use Pi 4, 4GB and Intel Movidius NCS2, Python 3.7. Any other suggestions are much appreciated. This has taken much too much time to get resolved. Hopefully there is an easy solution.
Many thanks, Martin from NZ

Pupan-cpe · 2020-04-14T18:47:22Z

thanks

shubhamkhandhar · 2020-05-03T09:44:48Z

I tried Zac's approach to uninstall and then install OpenCV. I tried using LD_PRELOAD. I tried using VIRTUALWRAPPER_PYTHON. I tried mkvirtualenv cv2. None of them worked.
I use Pi 4, 4GB and Intel Movidius NCS2, Python 3.7. Any other suggestions are much appreciated. This has taken much too much time to get resolved. Hopefully there is an easy solution.
Many thanks, Martin from NZ

I am also getting the same issue on rpi 4 . Someone plz help

shubhamkhandhar · 2020-05-03T11:04:45Z

Did you found any solution please post it

60999 · 2020-05-06T09:01:24Z

$ vi .bashrc (or nano .bashrc under root)
add：export LD_PRELOAD=/usr/lib/arm-linux-gnueabihf/libatomic.so.1
exit with save file.
$ source .bashrc
$ python3
Python 3.7.3 (default, Dec 20 2019, 18:57:59)
[GCC 8.3.0] on linux
Type "help", "copyright", "credits" or "license" for more information.

It will work.

yoher · 2020-05-14T01:02:30Z

Update following @Zach-OP advice to stay away from the latest version:
On a Pi4 today :

OpenCV 4.1.1.26 KO
OpenCV 4.1.0.25 imports properly and seems to run fine so far
=> Install with pip3 install opencv-python==4.1.0.25

shubhamkhandhar · 2020-05-15T07:53:47Z

Dear Sir, I have tried both the ways you have suggested me, but it seems none of them to be working, i am attaching the screeshots of the rpi terminal, od_problem_1) - It shows that the code doesn't run with sudo command. od_problem_2) - It shows that the code does run without sudo command. I am calling this code using another code which requires administrative rights for working as it contains flask api to connect to another api in another computer/laptop, so sudo needs to put there before working. please help.

…

On Thu, May 14, 2020 at 6:32 AM Yoann Hervieux ***@***.***> wrote: Update following @Zach-OP <https://github.com/Zach-OP> advice to stay away from the latest version: On a Pi4 today : - OpenCV 4.1.1.26 KO - OpenCV 4.1.0.25 imports properly and seems to run fine so far => Install with pip3 install opencv-python==4.1.0.25 — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#67 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AND7QXLTQZGGRB45VUOGI73RRM7LJANCNFSM4JPNARMQ> .

lukedavoli · 2020-05-15T23:46:06Z

god bless you

preyash2047 · 2020-05-25T09:16:25Z

thank you bro, it worked for me

Keylem · 2020-06-08T14:42:37Z

Thanks worked like charm with 4.1.1 😍

xlla · 2020-06-22T15:50:32Z

how to export LD_PRELOAD=/usr/lib/arm-linux-gnueabihf/libatomic.so.1
for sudo command ?
I want to use framebuffer over ssh, if invoke without sudo , it complain
pygame.error: Unable to open a console terminal

mdjunaidahmed0123 · 2020-06-28T11:14:01Z

hi bharath4284
i too tried the same and same error i got again. did you install tensorflow ? if u did it then please tell me the command.

zimzamyoyoman · 2020-07-06T12:54:55Z

wDove1 · 2020-08-08T08:52:02Z

This happens when I try uninstalling any ideas?

pi@raspberrypi:~ $ pip3 uninstall opencv-python
Uninstalling opencv-python-4.1.1.26:
  Would remove:
    /usr/local/lib/python3.7/dist-packages/cv2/*
    /usr/local/lib/python3.7/dist-packages/opencv_python-4.1.1.26.dist-info/*
Proceed (y/n)? y
Exception:
Traceback (most recent call last):
  File "/usr/lib/python3.7/shutil.py", line 563, in move
    os.rename(src, real_dst)
PermissionError: [Errno 13] Permission denied: '/usr/local/lib/python3.7/dist-packages/cv2/LICENSE-3RD-PARTY.txt' -> '/tmp/pip-uninstall-wr2v2c8q/usr/local/lib/python3.7/dist-packages/cv2/LICENSE-3RD-PARTY.txt'

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 143, in main
    status = self.run(options, args)
  File "/usr/lib/python3/dist-packages/pip/_internal/commands/uninstall.py", line 75, in run
    auto_confirm=options.yes, verbose=self.verbosity > 0,
  File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 683, in uninstall
    uninstalled_pathset.remove(auto_confirm, verbose)
  File "/usr/lib/python3/dist-packages/pip/_internal/req/req_uninstall.py", line 224, in remove
    renames(path, new_path)
  File "/usr/lib/python3/dist-packages/pip/_internal/utils/misc.py", line 280, in renames
    shutil.move(old, new)
  File "/usr/lib/python3.7/shutil.py", line 578, in move
    os.unlink(src)
PermissionError: [Errno 13] Permission denied: '/usr/local/lib/python3.7/dist-packages/cv2/LICENSE-3RD-PARTY.txt'

Rich2020 · 2020-11-21T20:13:31Z

This happens when I try uninstalling any ideas?

pi@raspberrypi:~ $ pip3 uninstall opencv-python
Uninstalling opencv-python-4.1.1.26:
  Would remove:
    /usr/local/lib/python3.7/dist-packages/cv2/*
    /usr/local/lib/python3.7/dist-packages/opencv_python-4.1.1.26.dist-info/*
Proceed (y/n)? y
Exception:
Traceback (most recent call last):
  File "/usr/lib/python3.7/shutil.py", line 563, in move
    os.rename(src, real_dst)
PermissionError: [Errno 13] Permission denied: '/usr/local/lib/python3.7/dist-packages/cv2/LICENSE-3RD-PARTY.txt' -> '/tmp/pip-uninstall-wr2v2c8q/usr/local/lib/python3.7/dist-packages/cv2/LICENSE-3RD-PARTY.txt'

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 143, in main
    status = self.run(options, args)
  File "/usr/lib/python3/dist-packages/pip/_internal/commands/uninstall.py", line 75, in run
    auto_confirm=options.yes, verbose=self.verbosity > 0,
  File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 683, in uninstall
    uninstalled_pathset.remove(auto_confirm, verbose)
  File "/usr/lib/python3/dist-packages/pip/_internal/req/req_uninstall.py", line 224, in remove
    renames(path, new_path)
  File "/usr/lib/python3/dist-packages/pip/_internal/utils/misc.py", line 280, in renames
    shutil.move(old, new)
  File "/usr/lib/python3.7/shutil.py", line 578, in move
    os.unlink(src)
PermissionError: [Errno 13] Permission denied: '/usr/local/lib/python3.7/dist-packages/cv2/LICENSE-3RD-PARTY.txt'

It says "permission denied" - you forgot to use sudo:

pip3 uninstall opencv-python

Getsethi · 2021-04-07T11:25:59Z

ImportError Traceback (most recent call last)
in ()
4 import pybind11
5 import astropy
----> 6 import pygedm

1 frames
/usr/local/lib/python3.7/dist-packages/pygedm/ne2001_wrapper.py in ()
3 from functools import wraps
4 from astropy import units as u
----> 5 from . import dmdsm # f2py FORTRAN object
6 from . import density # f2py FORTRAN object
7

ImportError: /usr/local/lib/python3.7/dist-packages/pygedm/dmdsm.so: undefined symbol: PyCObject_Type

Please help resolve this

DorineMaillet · 2021-05-03T12:46:31Z

Thanks a lot, it still works today and I needed it soooo much !!!!

ArduCAM mentioned this issue Jan 23, 2020

PTZ Controller not responsive on RaspberryPi 4 ArduCAM/PTZ-Camera-Controller#3

Open

rookiecj mentioned this issue Feb 1, 2020

opencv import 오류 수정 tbmoon/kalman_filter#2

Merged

ghost mentioned this issue Feb 5, 2020

PlantCV on Raspberry Pi 4 with BerryConda - advise please. danforthcenter/plantcv#521

Closed

davidmathew mentioned this issue Mar 10, 2020

opencv: undefined symbol: __atomic_fetch_add_8 piwheels/packages#59

Closed

ComputerOnFire mentioned this issue Jun 8, 2020

opencv added (fixes #760) treehouses/builder#761

Merged

maisen20 mentioned this issue Jun 21, 2020

IndexError: list index out of range (input_shape) serengil/deepface#52

Closed

ImportError: /usr/local/lib/python3.7/dist-packages/cv2/cv2.cpython-37m-arm-linux-gnueabihf.so: undefined symbol: __atomic_fetch_add_8 #67

ImportError: /usr/local/lib/python3.7/dist-packages/cv2/cv2.cpython-37m-arm-linux-gnueabihf.so: undefined symbol: __atomic_fetch_add_8 #67

Comments

happy-little-zhang commented Nov 20, 2019

mentianyi commented Nov 21, 2019

saifsmailbox98 commented Nov 21, 2019

saifsmailbox98 commented Nov 21, 2019 • edited

mentianyi commented Nov 22, 2019

saifsmailbox98 commented Nov 22, 2019

Zach-OP commented Nov 22, 2019

Zach-OP commented Nov 22, 2019

happy-little-zhang commented Nov 24, 2019

happy-little-zhang commented Nov 24, 2019

jlbs86 commented Dec 2, 2019

ueray commented Dec 18, 2019

Pupan-cpe commented Dec 25, 2019

insung3511 commented Jan 1, 2020

deysarkarswarup commented Jan 8, 2020

andromeda1998 commented Jan 27, 2020

vietanha74 commented Feb 3, 2020

Riverlox12 commented Feb 9, 2020

modarm-e commented Feb 16, 2020

gdoise commented Feb 20, 2020 • edited

svsadafule commented Feb 27, 2020

bharath-velisala commented Feb 27, 2020

Riverlox12 commented Feb 28, 2020 via email

Edwiinrtz commented Mar 7, 2020

harshbhatt99 commented Mar 27, 2020

Martink-NZ commented Apr 4, 2020

Pupan-cpe commented Apr 14, 2020

shubhamkhandhar commented May 3, 2020

shubhamkhandhar commented May 3, 2020

60999 commented May 6, 2020

yoher commented May 14, 2020

shubhamkhandhar commented May 15, 2020 via email

lukedavoli commented May 15, 2020

preyash2047 commented May 25, 2020

Keylem commented Jun 8, 2020

xlla commented Jun 22, 2020

mdjunaidahmed0123 commented Jun 28, 2020

zimzamyoyoman commented Jul 6, 2020

wDove1 commented Aug 8, 2020

Rich2020 commented Nov 21, 2020

Getsethi commented Apr 7, 2021

DorineMaillet commented May 3, 2021

saifsmailbox98 commented Nov 21, 2019 •

edited

gdoise commented Feb 20, 2020 •

edited