From dabaf3c63d00f7768fb2a0be3bceee1d2bd1d97c Mon Sep 17 00:00:00 2001 From: Paulo Lins Date: Tue, 3 Jan 2023 11:39:06 +0000 Subject: [PATCH 1/3] patch test DB schema for 110 --- modules/t/test-genome-DBs/homo_sapiens/funcgen/meta.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/modules/t/test-genome-DBs/homo_sapiens/funcgen/meta.txt b/modules/t/test-genome-DBs/homo_sapiens/funcgen/meta.txt index 3b19a3f39..9da5bab15 100644 --- a/modules/t/test-genome-DBs/homo_sapiens/funcgen/meta.txt +++ b/modules/t/test-genome-DBs/homo_sapiens/funcgen/meta.txt @@ -199,3 +199,4 @@ 791 \N patch patch_107_108_a.sql|schema_version 792 \N patch patch_107_108_b.sql|New epigenome_track table 793 \N patch patch_108_109_a.sql|schema_version +794 \N patch patch_109_110_a.sql|schema_version \ No newline at end of file From 36af83acbcf6112b098edf40fd0de1dd378293de Mon Sep 17 00:00:00 2001 From: Paulo Lins Date: Tue, 3 Jan 2023 11:39:58 +0000 Subject: [PATCH 2/3] add schema patch for release 110 in table file --- sql/table.sql | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/sql/table.sql b/sql/table.sql index 6c96a5bdd..87a23e050 100755 --- a/sql/table.sql +++ b/sql/table.sql @@ -1685,8 +1685,8 @@ CREATE TABLE `meta` ( INSERT INTO meta (meta_key, meta_value, species_id) VALUES ('schema_type', 'funcgen', NULL); -- Update and remove these for each release to avoid erroneous patching -INSERT INTO meta (species_id, meta_key, meta_value) VALUES (NULL, 'schema_version', '109'); -INSERT INTO meta (species_id, meta_key, meta_value) VALUES (NULL, 'patch', 'patch_108_109_a.sql|schema_version'); +INSERT INTO meta (species_id, meta_key, meta_value) VALUES (NULL, 'schema_version', '110'); +INSERT INTO meta (species_id, meta_key, meta_value) VALUES (NULL, 'patch', 'patch_109_110_a.sql|schema_version'); /** @table meta_coord From cfec21ecb8d2bcfaf7d5830e7aacb8ae463f464d Mon Sep 17 00:00:00 2001 From: Paulo Lins Date: Tue, 3 Jan 2023 11:47:17 +0000 Subject: [PATCH 3/3] patch test DB schema for 110 --- modules/t/test-genome-DBs/homo_sapiens/funcgen/meta.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/modules/t/test-genome-DBs/homo_sapiens/funcgen/meta.txt b/modules/t/test-genome-DBs/homo_sapiens/funcgen/meta.txt index 9da5bab15..9a6a0c809 100644 --- a/modules/t/test-genome-DBs/homo_sapiens/funcgen/meta.txt +++ b/modules/t/test-genome-DBs/homo_sapiens/funcgen/meta.txt @@ -1,4 +1,4 @@ -534 \N schema_version 108 +534 \N schema_version 110 156 1 species.production_name homo_sapiens 223 \N schema_type funcgen 589 \N patch patch_78_79_a.sql|schema_version