From a5d6828a4980b682e00846f3571b6c28f31ce97f Mon Sep 17 00:00:00 2001 From: Marc Chakiachvili Date: Thu, 9 Nov 2023 16:00:49 +0000 Subject: [PATCH] Revert "Checksum name incorrect" --- .../production/metadata/api/models/assembly.py | 15 +++++---------- .../api/sample/ensembl_metadata/table.sql | 2 +- 2 files changed, 6 insertions(+), 11 deletions(-) diff --git a/src/ensembl/production/metadata/api/models/assembly.py b/src/ensembl/production/metadata/api/models/assembly.py index 733776f9..32602496 100644 --- a/src/ensembl/production/metadata/api/models/assembly.py +++ b/src/ensembl/production/metadata/api/models/assembly.py @@ -57,15 +57,10 @@ class AssemblySequence(Base): length = Column(Integer, nullable=False) sequence_location = Column(String(10)) md5 = Column(String(32)) - # column need renaming as well - sha512t24u = Column(String(128)) + sha512t4u = Column(String(128)) + # One to many relationships + # none + # many to one relationships + # assembly_id within assembly assembly = relationship('Assembly', back_populates="assembly_sequences") - # backward compatibility with old column name sha512t2u - @property - def sha512t2u(self): - return self.sha512t24u - - @sha512t2u.setter - def sha512t2u(self, checksum): - self.sha512t24u = checksum diff --git a/src/ensembl/production/metadata/api/sample/ensembl_metadata/table.sql b/src/ensembl/production/metadata/api/sample/ensembl_metadata/table.sql index 9f6cb5a6..355b4bfb 100644 --- a/src/ensembl/production/metadata/api/sample/ensembl_metadata/table.sql +++ b/src/ensembl/production/metadata/api/sample/ensembl_metadata/table.sql @@ -37,7 +37,7 @@ CREATE TABLE assembly_sequence chromosome_rank int null, sequence_location varchar(10) null, md5 varchar(32) null, - sha512t24u varchar(128) null, + sha512t4u varchar(128) null, constraint assembly_sequence_assembly_id_accession_5f3e5119_uniq unique (assembly_id, accession), constraint assembly_sequence_assembly_id_2a84ddcb_fk_assembly_assembly_id