From 3d5d77ff4121fba57e8c98385faffb95456b3494 Mon Sep 17 00:00:00 2001 From: Marc Chakiachvili Date: Mon, 19 Feb 2024 17:33:12 +0000 Subject: [PATCH] Update FTP path for good ... twice --- src/ensembl/production/metadata/api/models/genome.py | 2 +- src/tests/test_api.py | 4 ++-- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/src/ensembl/production/metadata/api/models/genome.py b/src/ensembl/production/metadata/api/models/genome.py index a59ca784..ecd51e60 100644 --- a/src/ensembl/production/metadata/api/models/genome.py +++ b/src/ensembl/production/metadata/api/models/genome.py @@ -77,7 +77,7 @@ def get_public_path(self, dataset_type='all', release=None): # Defining path templates path_templates = { - 'genebuild': f"{common_path}/genebuild/{genebuild_version}", + 'genebuild': f"{common_path}/geneset/{genebuild_version}", 'assembly': f"{common_path}/genome", 'homologies': f"{common_path}/homology/{genebuild_version}", 'regulation': f"{common_path}/regulation", diff --git a/src/tests/test_api.py b/src/tests/test_api.py index 5912fea2..340372a0 100644 --- a/src/tests/test_api.py +++ b/src/tests/test_api.py @@ -38,7 +38,7 @@ def test_get_public_path(self, multi_dbs): assert len(paths) == 4 # assert all("/genebuild/" in path for path in paths) path = genome.get_public_path(dataset_type='genebuild') - assert path[0]['path'] == 'Saccharomyces_cerevisiae_S288c/GCA_000146045.2/ensembl/genebuild/2018_10' + assert path[0]['path'] == 'Saccharomyces_cerevisiae_S288c/GCA_000146045.2/ensembl/geneset/2018_10' path = genome.get_public_path(dataset_type='assembly') assert path[0]['path'] == 'Saccharomyces_cerevisiae_S288c/GCA_000146045.2/ensembl/genome' path = genome.get_public_path(dataset_type='variation') @@ -58,7 +58,7 @@ def test_default_public_path(self, multi_dbs): assert len(paths) == 5 # assert all("/genebuild/" in path for path in paths) path = genome.get_public_path(dataset_type='genebuild') - assert path[0]['path'] == 'Homo_sapiens/GCA_000001405.29/ensembl/genebuild/2023_03' + assert path[0]['path'] == 'Homo_sapiens/GCA_000001405.29/ensembl/geneset/2023_03' path = genome.get_public_path(dataset_type='assembly') assert path[0]['path'] == 'Homo_sapiens/GCA_000001405.29/ensembl/genome' path = genome.get_public_path(dataset_type='variation')