diff --git a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/DumpVEP_conf.pm b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/DumpVEP_conf.pm index 5a7b4af12..5c9e9789c 100644 --- a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/DumpVEP_conf.pm +++ b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/DumpVEP_conf.pm @@ -129,7 +129,7 @@ sub default_options { ], }, GRCh38 => { - bam => $self->o('data_dir').'/interim_GRCh38.p10_knownrefseq_alignments_2017-01-13.bam', + bam => $self->o('data_dir').'/GRCh38.p12_knownrefseq_alignments.bam', freq_vcf => [ { file => $self->o('data_dir').'/1KG.phase3.GRCh38_2018_02_26.vcf.gz',