From 57b4cd144c5b1f2ed8629e24e46bb70e0028ff30 Mon Sep 17 00:00:00 2001
From: pbuttigieg
Date: Tue, 4 Jul 2017 19:23:01 +0200
Subject: [PATCH] Addressing #520
---
src/envo/modules/entity_attribute_location.csv | 1 +
src/envo/modules/entity_attribute_location.obo | 54 ++++++++++++++------------
src/envo/modules/entity_attribute_location.owl | 49 ++++++++++++++++++-----
3 files changed, 71 insertions(+), 33 deletions(-)
diff --git a/src/envo/modules/entity_attribute_location.csv b/src/envo/modules/entity_attribute_location.csv
index fa60869..e76d94d 100644
--- a/src/envo/modules/entity_attribute_location.csv
+++ b/src/envo/modules/entity_attribute_location.csv
@@ -19,3 +19,4 @@ ENVO:09000017,,PATO:0000033,concentration,CHEBI:25555,nitrogen atom,ENVO:0000199
ENVO:09000018,,PATO:0000033,concentration,CHEBI:25555,nitrogen atom,ENVO:00002006,water
ENVO:09200006,,PATO:0000033,concentration,CHEBI:28938,ammonium,ENVO:00001998,soil
ENVO:09200007,,PATO:0000033,concentration,CHEBI:17632,nitrate,ENVO:00001998,soil
+ENVO:09000019,,PATO:0000033,concentration,CHEBI:17996,chloride,ENVO:00002006,water
\ No newline at end of file
diff --git a/src/envo/modules/entity_attribute_location.obo b/src/envo/modules/entity_attribute_location.obo
index 78b4919..a571c57 100644
--- a/src/envo/modules/entity_attribute_location.obo
+++ b/src/envo/modules/entity_attribute_location.obo
@@ -39,21 +39,21 @@ synonym: "water carbon atom amount" EXACT []
[Term]
id: ENVO:09000007
-name: concentration of of carbon atom in environmental material
-def: "The concentration of of a carbon atom when measured in environmental material." []
-synonym: "environmental material carbon atom concentration of" EXACT []
+name: concentration of carbon atom in environmental material
+def: "The concentration of a carbon atom when measured in environmental material." []
+synonym: "environmental material carbon atom concentration" EXACT []
[Term]
id: ENVO:09000008
-name: concentration of of carbon atom in soil
-def: "The concentration of of a carbon atom when measured in soil." []
-synonym: "soil carbon atom concentration of" EXACT []
+name: concentration of carbon atom in soil
+def: "The concentration of a carbon atom when measured in soil." []
+synonym: "soil carbon atom concentration" EXACT []
[Term]
id: ENVO:09000009
-name: concentration of of carbon atom in water
-def: "The concentration of of a carbon atom when measured in water." []
-synonym: "water carbon atom concentration of" EXACT []
+name: concentration of carbon atom in water
+def: "The concentration of a carbon atom when measured in water." []
+synonym: "water carbon atom concentration" EXACT []
[Term]
id: ENVO:09000010
@@ -93,31 +93,37 @@ synonym: "water nitrogen atom amount" EXACT []
[Term]
id: ENVO:09000016
-name: concentration of of nitrogen atom in environmental material
-def: "The concentration of of a nitrogen atom when measured in environmental material." []
-synonym: "environmental material nitrogen atom concentration of" EXACT []
+name: concentration of nitrogen atom in environmental material
+def: "The concentration of a nitrogen atom when measured in environmental material." []
+synonym: "environmental material nitrogen atom concentration" EXACT []
[Term]
id: ENVO:09000017
-name: concentration of of nitrogen atom in soil
-def: "The concentration of of a nitrogen atom when measured in soil." []
-synonym: "soil nitrogen atom concentration of" EXACT []
+name: concentration of nitrogen atom in soil
+def: "The concentration of a nitrogen atom when measured in soil." []
+synonym: "soil nitrogen atom concentration" EXACT []
[Term]
id: ENVO:09000018
-name: concentration of of nitrogen atom in water
-def: "The concentration of of a nitrogen atom when measured in water." []
-synonym: "water nitrogen atom concentration of" EXACT []
+name: concentration of nitrogen atom in water
+def: "The concentration of a nitrogen atom when measured in water." []
+synonym: "water nitrogen atom concentration" EXACT []
+
+[Term]
+id: ENVO:09000019
+name: concentration of chloride in water
+def: "The concentration of a chloride when measured in water." []
+synonym: "water chloride concentration" EXACT []
[Term]
id: ENVO:09200006
-name: concentration of of ammonium in soil
-def: "The concentration of of a ammonium when measured in soil." []
-synonym: "soil ammonium concentration of" EXACT []
+name: concentration of ammonium in soil
+def: "The concentration of a ammonium when measured in soil." []
+synonym: "soil ammonium concentration" EXACT []
[Term]
id: ENVO:09200007
-name: concentration of of nitrate in soil
-def: "The concentration of of a nitrate when measured in soil." []
-synonym: "soil nitrate concentration of" EXACT []
+name: concentration of nitrate in soil
+def: "The concentration of a nitrate when measured in soil." []
+synonym: "soil nitrate concentration" EXACT []
diff --git a/src/envo/modules/entity_attribute_location.owl b/src/envo/modules/entity_attribute_location.owl
index b565e01..5e827df 100644
--- a/src/envo/modules/entity_attribute_location.owl
+++ b/src/envo/modules/entity_attribute_location.owl
@@ -61,12 +61,6 @@
-
-
-
-
-
-
+
+
+
+
+
@@ -707,6 +707,37 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ The concentration of chloride ions when measured in water.
+ water chloride concentration
+ concentration of chloride in water
+
+
+
+
@@ -731,7 +762,7 @@
- The concentration of a ammonium when measured in soil.
+ The concentration of ammonium ions when measured in soil.
soil ammonium concentration
concentration of ammonium in soil
@@ -762,7 +793,7 @@
- The concentration of a nitrate when measured in soil.
+ The concentration of nitrate ions when measured in soil.
soil nitrate concentration
concentration of nitrate in soil
@@ -788,5 +819,5 @@
-
+