Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Already on GitHub? Sign in to your account

calcareous rock #187

Open
cmungall opened this Issue May 11, 2008 · 6 comments

Comments

Projects
None yet
2 participants
Owner

cmungall commented May 11, 2008

ENVO:02000046 calcareous ooze

but not calcareous rock

Original comment by: cmungall

Owner

cmungall commented May 20, 2008

Logged In: YES
user_id=1859864
Originator: NO

Hello Chris,
I was looking where to put this in the ontology…
Looking at the rock node.
And at available definitions and terms that already exist under ‘rock’.
http://en.wikipedia.org/wiki/Calcareous
Calcareous refers to a sediment, sedimentary rock, or soil type which is formed from or contains a high proportion of calcium carbonate in the form of calcite or aragonite.

And we have Limestone:
wikipedia definition: Limestone is a sedimentary rock composed largely of the mineral calcite (calcium carbonate: CaCO3).

Definitions at: http://en.wikisource.org/wiki/Glossary\of\Geological\and\other\Scientific\_terms\used\in\Principles\of\Geology
Calcareous rock. Limestone. Etym., Calx, lime.

From this, at least, these are looking kind of synonymous, what is your opinion.

Cheers,
Lynn

Original comment by: lynn_schriml

Owner

cmungall commented May 20, 2008

Logged In: YES
user_id=1859864
Originator: NO

Hello Chris,
I was looking where to put this in the ontology…
Looking at the rock node.
And at available definitions and terms that already exist under ‘rock’.
http://en.wikipedia.org/wiki/Calcareous
Calcareous refers to a sediment, sedimentary rock, or soil type which is formed from or contains a high proportion of calcium carbonate in the form of calcite or aragonite.

And we have Limestone:
wikipedia definition: Limestone is a sedimentary rock composed largely of the mineral calcite (calcium carbonate: CaCO3).

Definitions at: http://en.wikisource.org/wiki/Glossary\of\Geological\and\other\Scientific\_terms\used\in\Principles\of\Geology
Calcareous rock. Limestone. Etym., Calx, lime.

From this, at least, these are looking kind of synonymous, what is your opinion.

Cheers,
Lynn

Original comment by: lynn_schriml

Owner

cmungall commented May 22, 2008

Logged In: YES
user_id=254723
Originator: YES

ah ok, synonym should be fine. Forget my exact use for this, think it was for annotating the GSC/GOLD table

Original comment by: cmungall

cmungall self-assigned this Jun 17, 2015

Owner

pbuttigieg commented Sep 1, 2015

I think we should add calcareous to PATO and then, perhaps, create a class in ENVO that can be populated by inference.

Owner

cmungall commented Sep 1, 2015

PATO:0001447 ! calcified

Owner

cmungall commented Sep 1, 2015

Note that I originally requested this (2008!) to map GOLD, but this is probably superseded by #101

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment