Popular repositories
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vibrio-biofilm-formation
vibrio-biofilm-formation PublicIn silico analysis of promoter architecture for biofilm formation genes involved in Vibrio cholerae
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control_seq_gen
control_seq_gen PublicGenerates control sequences for motif analysis. Goal is to maintain the statistical parameters of the input sequences (i.e. nucleotide composition) without recapitulating the sites of interest.
Python 1
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A project to generate models of regulated bacterial promoters using genetic programming
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Pulls sequences of a reference gene from a set of genomes. A MSA of these sequences can be used to construct a phylogeny.
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Aims to determine the structural conservation (i.e. gene order) of an operon within a given taxonomic clade.