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Update makefile to sparsehash-2.0.3
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clipper/Makefile
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@@ -42,7 +42,7 @@ getrel: |
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$(PKG).spec:
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perl -pe 's/%RELEASE%/${REL}/' $(PKG).spex > $(PKG).spec
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-$(PKG).tar.gz: Makefile $(TOOLS) $(SRC) $(PKG).spec fastq-lib.cpp fastq-lib.h sam-stats.cpp fastq-stats.cpp gcModel.cpp gcModel.h varcall.cpp utils.h README CHANGES sparsehash-2.0.2 samtools/*.c t
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+$(PKG).tar.gz: Makefile $(TOOLS) $(SRC) $(PKG).spec fastq-lib.cpp fastq-lib.h sam-stats.cpp fastq-stats.cpp gcModel.cpp gcModel.h varcall.cpp utils.h README CHANGES sparsehash-2.0.3 samtools/*.c t
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rm -rf $(PKG).${VER}-${REL}
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mkdir $(PKG).${VER}-${REL}
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mkdir $(PKG).${VER}-${REL}/tidx
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@@ -68,10 +68,10 @@ $(PKG).${VER}-${REL}.tar.gz: $(PKG).tar.gz |
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%: %.cpp fastq-lib.cpp fastq-lib.h sparsehash
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$(CC) $(CFLAGS) $< fastq-lib.cpp -o $@
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-sparsehash: sparsehash-2.0.2
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- cd sparsehash-2.0.2; ./configure; make
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+sparsehash: sparsehash-2.0.3
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+ cd sparsehash-2.0.3; ./configure; make
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mkdir sparsehash
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- cp -r sparsehash-2.0.2/src/sparsehash/* sparsehash/
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+ cp -r sparsehash-2.0.3/src/sparsehash/* sparsehash/
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# why the libbam.a doesn't work? not sure... *.o works
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sam-stats: sam-stats.cpp samtools/libbam.a samtools/bam.h fastq-lib.h sparsehash
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