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@FASTGenomics

FASTGenomics

FASTGenomics – The platform for single-cell transcriptomics

Pinned repositories

  1. R readers for different data formats for FASTGenomics.

    R

  2. Python readers for different data formats for FASTGenomics.

    Python

  3. Standard workflow in R as used by the Schultze lab at LIMES Institute, Bonn, loosely based on the Seurat guided clustering tutorial.

    Jupyter Notebook

  4. Generalized best practices workflow based on Luecken & Theis (2019)

    Jupyter Notebook 1

  5. Docker-compose and documentation on how to run FASTGenomics analysis on a local machine for testing

    1

  6. Directory with data sets used for testing various notebooks outside of FG

    1

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