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@GCA-VH-lab

Atkinson-Hauryliuk lab

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  1. FlaGs FlaGs Public

    Python 19 3

  2. uorf4u uorf4u Public

    uorf4u is a bioinformatics tool for conserved upstream ORF annotation.

    Shell 13 1

  3. FlaGs2 FlaGs2 Public

    Updated FlaGs version. Replaces tkinter module for matplotlib for the graphical output.

    Python 10 2

  4. msa4u msa4u Public

    A simple visualisation tool for Multiple Sequence Alignment.

    Shell 5

  5. RiboSeqPy RiboSeqPy Public

    Collection of routines for processing Ribo-Seq data.

    Python 3

  6. 2019-NAR 2019-NAR Public

    Pipeline for processing new1 riboseq data

    Python 1

Repositories

Showing 10 of 16 repositories
  • uorf4u Public

    uorf4u is a bioinformatics tool for conserved upstream ORF annotation.

    GCA-VH-lab/uorf4u’s past year of commit activity
    Shell 13 1 1 0 Updated Jan 21, 2025
  • FlaGs2 Public

    Updated FlaGs version. Replaces tkinter module for matplotlib for the graphical output.

    GCA-VH-lab/FlaGs2’s past year of commit activity
    Python 10 GPL-3.0 2 2 0 Updated Jul 15, 2024
  • tac_ms_af Public

    Alphafold predictions and scoring used in "Mechanism of phage sensing and abortion by toxin-antitoxin-chaperone systems"

    GCA-VH-lab/tac_ms_af’s past year of commit activity
    0 0 0 0 Updated Mar 25, 2024
  • NetFlax_data Public
    GCA-VH-lab/NetFlax_data’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Jul 9, 2023
  • FlaGs-Viz Public
    GCA-VH-lab/FlaGs-Viz’s past year of commit activity
    Python 0 0 0 0 Updated Jun 27, 2023
  • NetFlax-Tax Public
    GCA-VH-lab/NetFlax-Tax’s past year of commit activity
    Python 0 0 0 0 Updated Jun 27, 2023
  • msa4u Public

    A simple visualisation tool for Multiple Sequence Alignment.

    GCA-VH-lab/msa4u’s past year of commit activity
    Shell 5 WTFPL 0 1 0 Updated Jun 26, 2023
  • netflax Public
    GCA-VH-lab/netflax’s past year of commit activity
    0 0 0 0 Updated Mar 9, 2023
  • 2023_Cfr Public

    Cfr alignments and phylogenies

    GCA-VH-lab/2023_Cfr’s past year of commit activity
    0 0 0 0 Updated Dec 30, 2022
  • FlaGs Public
    GCA-VH-lab/FlaGs’s past year of commit activity
    Python 19 GPL-3.0 3 4 1 Updated Nov 8, 2022
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