GeneNetwork
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Pinned repositories
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cwltool
Forked from common-workflow-language/cwltoolCommon Workflow Language reference implementation
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GEMMA
Forked from genetics-statistics/GEMMAGenome-wide Efficient Mixed Model Association
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GeneNetwork (2nd generation)
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Deployment configuration, scripts and docs
Shell UpdatedOct 31, 2018 -
PKT
Forked from callahantiff/PKTPheKnowLater: Phenotype Knowledge Translator
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GeneNetwork (1st generation)
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GeneNetwork/JupyterLabs/Arvados
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Metadata editor
AGPL-3.0 UpdatedApr 5, 2018 -
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OBF Google Summer of Code
22 UpdatedJan 20, 2018 -
Shell Updated
Dec 19, 2017 -
GeneNetwork REST server
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shunit2
Forked from kward/shunit2Automatically exported from code.google.com/p/shunit2
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WARNING: REPO HAS MOVED TO GITLAB!
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WARNING: REPO HAS MOVED TO GITLAB!
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Execution daemon for gn_server
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Twitter-Post-Fetcher
Forked from jasonmayes/Twitter-Post-FetcherWARNING: REPO HAS MOVED TO GITLAB!
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1 Updated
Nov 4, 2016 -
Performant version of pylmm for Genenetwork.org
Python AGPL-3.0 UpdatedNov 2, 2016 -
dalliance
Forked from dasmoth/dallianceInteractive web-based genome browser.
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Maintenance and conversion scripts for GeneNetwork
Ruby AGPL-3.0 UpdatedOct 7, 2016 -
CTLmapping
Forked from pjotrp/CTLmappingCorrelated Trait Locus (CTL) mapping
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plink-ng
Forked from chrchang/plink-ngA comprehensive update to the PLINK association analysis toolset. Beta testing of the first new version (1.90), focused on speed and memory efficiency improvements, is finishing up. Future development will revolve around critical extensions to the core file format (multiallelic variants, dosage, phase).
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Git source repo on a diet
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Those bad software packages with a non-free license that can't go upstream
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Piddle as used by Genenetwork
Python UpdatedFeb 25, 2016 -
pylmm
Forked from nickFurlotte/pylmmA fast and lightweight python-based linear mixed-model solver for use in genome-wide association studies.
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WGCNA
Forked from cran/WGCNAGN2 adaption of the CRAN R package repository. WGCNA — Weighted Correlation Network Analysis. Homepage: http://www.genetics.ucla.edu/labs/horvath/CoexpressionNetwork/Rpackages/WGCNA/
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Design/architecture documents for Genenetwork
CC0-1.0 UpdatedDec 28, 2015 -
gn2-docker
Forked from lomereiter/gn2-dockerGeneNetwork2 development server installation
