From f8ff8d82f29173bd491ba59dc71576f5f9a31a1f Mon Sep 17 00:00:00 2001
From: Magnus Manske <magnusmanske@users.noreply.github.com>
Date: Mon, 12 Dec 2005 12:56:39 +0000
Subject: [PATCH] *** empty log message ***

---
 Alignment.cpp   | 4 +++-
 MyFrame.cpp     | 1 +
 TVectorTree.cpp | 8 +++++---
 TVectorTree.h   | 1 +
 main.cpp        | 4 ++++
 main.h          | 2 ++
 6 files changed, 16 insertions(+), 4 deletions(-)

diff --git a/Alignment.cpp b/Alignment.cpp
index df1444d8..96e738ba 100755
--- a/Alignment.cpp
+++ b/Alignment.cpp
@@ -4,7 +4,9 @@
 #include "Alignment.h"
 #include <wx/textfile.h>
 
-//#define USE_EXTERNAL_CLUSTALW
+#ifdef __DEBIAN__
+	#define USE_EXTERNAL_CLUSTALW
+#endif
 
 #ifndef USE_EXTERNAL_CLUSTALW
  #include "clustalw/clustalw.h"
diff --git a/MyFrame.cpp b/MyFrame.cpp
index 999e6125..517b5693 100755
--- a/MyFrame.cpp
+++ b/MyFrame.cpp
@@ -1839,6 +1839,7 @@ void MyFrame::OnSashDrag(wxSashEvent& event)
     }
     wxLayoutAlgorithm layout;
     layout.LayoutFrame(this);
+	Refresh () ;
 
     // Leaves bits of itself behind sometimes
 //    GetClientWindow()->Refresh();    
diff --git a/TVectorTree.cpp b/TVectorTree.cpp
index 797375a9..5580952e 100755
--- a/TVectorTree.cpp
+++ b/TVectorTree.cpp
@@ -15,6 +15,9 @@ BEGIN_EVENT_TABLE(TVectorTree, wxTreeCtrl)
     EVT_MENU(PC_ITEM_DELETE, TVectorTree::itemDelete)
     EVT_MENU(PC_ITEM_HIDE, TVectorTree::itemShowHide)
     EVT_MENU(PC_ITEM_SHOW, TVectorTree::itemShowHide)
+    EVT_MENU(PC_ITEM_COPY_DNA, TVectorTree::itemCopyDNA)
+    EVT_MENU(PC_ITEM_BLAST_DNA, TVectorTree::blastDNA)
+    EVT_MENU(PC_ITEM_BLAST_AA, TVectorTree::blastAA)
     
     EVT_MENU(PRIMER_FORWARD, TVectorTree::OnPrimerForward)
     EVT_MENU(PRIMER_BACKWARD, TVectorTree::OnPrimerBackward)
@@ -30,8 +33,6 @@ BEGIN_EVENT_TABLE(TVectorTree, wxTreeCtrl)
     EVT_MENU(PC_RS_ADD_AND_CUT, TVectorTree::rsAddAndCut)
     EVT_MENU(PC_RS_CUT_WITH_COCKTAIL, TVectorTree::rsCutWithCocktail)
     EVT_MENU(PC_VECTOR_EDIT, TVectorTree::vecEdit)
-    EVT_MENU(PC_BLAST_DNA, TVectorTree::blastDNA)
-    EVT_MENU(PC_BLAST_AA, TVectorTree::blastAA)
 END_EVENT_TABLE()
 
 
@@ -336,4 +337,5 @@ void TVectorTree::OnPrimerBoth ( wxCommandEvent &ev )
 void TVectorTree::OnPrimerMutation ( wxCommandEvent &ev )
     { p->cPlasmid->OnPrimerMutation ( ev ) ; }
 
-
+void TVectorTree::itemCopyDNA ( wxCommandEvent &ev )
+    { p->cPlasmid->itemCopyDNA ( ev ) ; }
diff --git a/TVectorTree.h b/TVectorTree.h
index a7788824..387fa1ae 100755
--- a/TVectorTree.h
+++ b/TVectorTree.h
@@ -58,6 +58,7 @@ class TVectorTree : public wxTreeCtrl
     void rsAddAndCut ( wxCommandEvent &ev ) ; ///< Event redirect to parent child
     void rsCutWithCocktail ( wxCommandEvent &ev ) ; ///< Event redirect to parent child
     void vecEdit ( wxCommandEvent &ev ) ; ///< Event redirect to parent child
+    void itemCopyDNA ( wxCommandEvent &ev ) ; ///< Event redirect to parent child
     void blastDNA ( wxCommandEvent &ev ) ; ///< Event redirect to parent child
     void blastAA ( wxCommandEvent &ev ) ; ///< Event redirect to parent child
     
diff --git a/main.cpp b/main.cpp
index 0120fab2..2cde5887 100755
--- a/main.cpp
+++ b/main.cpp
@@ -233,6 +233,10 @@ bool MyApp::OnInit()
 	wxApp::s_macExitMenuItemId = MDI_QUIT;
 //	wxApp::s_macHelpMenuTitleName = "Help";
 	
+#endif
+
+#ifdef __DEBIAN__
+	homedir = _T("/usr/share/gentle") ;
 #endif
 
     wxInitAllImageHandlers() ;
diff --git a/main.h b/main.h
index a8bf0853..4f14b72f 100755
--- a/main.h
+++ b/main.h
@@ -4,6 +4,8 @@
 #ifndef _MAIN_H_
 #define _MAIN_H_
 
+//#define __DEBIAN__
+
 #define GENTLE_VERSION_MAJOR 1
 #define GENTLE_VERSION_MINOR 8
 #define GENTLE_VERSION_SUB 0