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Commits on Dec 15, 2003
  1. This commit was manufactured by cvs2svn to create tag

    Nobody
    Nobody committed Dec 15, 2003
    'ForRelease1_58'.
  2. fixed docs to explain a bit more about namespace mapping

    Mark Wilkinson
    Mark Wilkinson committed Dec 15, 2003
  3. fixed docs to reflect the new name of this script

    Mark Wilkinson
    Mark Wilkinson committed Dec 15, 2003
  4. fixed docs to reflect the new name of this script

    Mark Wilkinson
    Mark Wilkinson committed Dec 15, 2003
  5. updating chado conf to make it more generic

    Scott Cain
    Scott Cain committed Dec 15, 2003
  6. updating for 1.58 release

    Scott Cain
    Scott Cain committed Dec 15, 2003
  7. debugging moby services

    Mark Wilkinson
    Mark Wilkinson committed Dec 15, 2003
  8. added a script to the /bin/ folder that reads the conf files and auto…

    Mark Wilkinson
    Mark Wilkinson committed Dec 15, 2003
    …-registers the Gbrowse MOBY services in MOBY Central. this hasn't been tested yet, as I need to run it on a publicly visible machine to test it. Testing for the rest of the day
  9. adding new configuration options to the moby conf file. validating na…

    Mark Wilkinson
    Mark Wilkinson committed Dec 15, 2003
    …mespaces before executing service.
  10. fixed cgi installed to not try to install sub directories in the cgi-…

    Scott Cain
    Scott Cain committed Dec 15, 2003
    …bin directory.
  11. don't know why this didnt go in yesterday, but i was having a cvs hel…

    Mark Wilkinson
    Mark Wilkinson committed Dec 15, 2003
    …l-day yesterday. Sorry to everyone who tried to install in the last 24 hours.
  12. minor documentation fix

    Scott Cain
    Scott Cain committed Dec 15, 2003
  13. fixed the "landmark not found" error that occurred when switching fro…

    lstein committed Dec 15, 2003
    …m one source database to another
Commits on Dec 14, 2003
  1. that should do it. weird problems with CVS this morning. not enough c…

    Mark Wilkinson
    Mark Wilkinson committed Dec 14, 2003
    …offee.
  2. modified the installation such that it will run the substitutions on …

    Mark Wilkinson
    Mark Wilkinson committed Dec 14, 2003
    …the services module and install them in the conf directory. removed the 'raw' files and replaced them with .PLS and .PL files. Added moby-related files to the install_utils utility. updated manifest and makefile. Still deciding how exactly to set up the moby configuration
Commits on Dec 13, 2003
Commits on Dec 12, 2003
  1. use strict, found errors.

    Mark Wilkinson
    Mark Wilkinson committed Dec 12, 2003
  2. the first two MOBY services that should work with gbrowse 'OOTB' (wit…

    Mark Wilkinson
    Mark Wilkinson committed Dec 12, 2003
    …h a bit of configuration). various things are hard-coded at the moment until I decide on the best method for configuring them at install-time. We'll also need a script, configured at install time, that will auto-register these services with MOBY Central, but that will come later.
  3. restored linking to groups, but link rules will fail if the same feat…

    lstein committed Dec 12, 2003
    …ure type is contained in two different grouped tracks
Commits on Dec 11, 2003
  1. fix to remove init variable warnings

    Scott Cain
    Scott Cain committed Dec 11, 2003
Commits on Dec 10, 2003
Commits on Dec 6, 2003
  1. preliminary DAS support; fixed link URL bug that occurred when same f…

    lstein committed Dec 6, 2003
    …eature type occurred in multiple tracks
Commits on Dec 2, 2003
  1. support mod_perl 1.99 as well as 1.98. Also only print factory, segme…

    Jason Stajich
    Jason Stajich committed Dec 2, 2003
    …nt warnings when debugging is on
  2. minor formatting change (as a result of pod2text)

    Scott Cain
    Scott Cain committed Dec 2, 2003
  3. syncing INSTALL.pod with INSTALL

    Scott Cain
    Scott Cain committed Dec 2, 2003
  4. unset DEGUB

    Scott Cain
    Scott Cain committed Dec 2, 2003
Commits on Dec 1, 2003
  1. removed a debugging print

    Scott Cain
    Scott Cain committed Dec 1, 2003
  2. minor formatting changes

    Scott Cain
    Scott Cain committed Dec 1, 2003
Commits on Nov 24, 2003
  1. fixed cvtermhash to allow both 'partof' and 'part_of'

    Scott Cain
    Scott Cain committed Nov 24, 2003
  2. removed redundant graph_type line

    Scott Cain
    Scott Cain committed Nov 24, 2003