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Commits on May 4, 2002
  1. This is release 1.41

    lstein committed May 4, 2002
  2. Added support for gbrowse_img, a script that does nothing but render

    the image without the image map or navigation buttons.
    lstein committed May 4, 2002
Commits on Apr 29, 2002
Commits on Apr 28, 2002
Commits on Apr 15, 2002
Commits on Apr 13, 2002
  1. this is now version 1.40

    lstein committed Apr 13, 2002
Commits on Apr 12, 2002
  1. * Fixed problems compiling and installing on Solaris systems.

    * Added the wormbase_gene aggregator.  Useful for the c. elegans gff file.
    * If you pick up the latest bioperl-live (or apply extras/bioperl-1.0.patch)
    there are fixes in Bio::Graphics that prevent genes from disappearing
    when zoomed all the way into an intron.
    lstein committed Apr 12, 2002
Commits on Apr 11, 2002
  1. fixed Makefile to run on solaris

    lstein committed Apr 11, 2002
Commits on Apr 9, 2002
  1. 1.38 Mon Apr 8 21:16:12 EDT 2002

    	* Previous version would crash on vanilla Bioperl 1.0 installations.
    	  This problem has been fixed, but at the cost of disabling wildcard
    	  searches.  To get wildcard searches, upgrade to Bioperl 1.01 using
    	  CVS or the patch file in extras/bioperl-1.0.patch.
    	* Fixed aesthetic problems with a phantom "plugin:Restriction Sites"
    	  entry appearing on the key even when restriction sites are turned
     	  off.
    	* Fixed intermittent "Couldn't open database" errors.
    	* Fixed intermittent scrambling of user settings.
    lstein committed Apr 9, 2002
Commits on Apr 8, 2002
  1. Released version 1.37 did not work with published Bioperl 1.00

    (actually requires some changes that won't appear until the next bufix
    release).  Version 1.38 of GBrowse works around these problems at the
    cost of sacrificing a minor feature (ability to use wildcards in
    search strings).
    lstein committed Apr 8, 2002
Commits on Apr 6, 2002
Commits on Apr 3, 2002
  1. worked around the stale config cache problem; added bump control to R…

    …estrictionSite plugin
    lstein committed Apr 3, 2002
  2. quashed some minor bugs but there is still a show-stopper error in th…

    …e cookie handling -- settings get losttail -f /usr/local/wormbase/logs/error_logtail -f /usr/local/wormbase/logs/error_log
    lstein committed Apr 3, 2002
Commits on Apr 1, 2002
Commits on Mar 31, 2002
  1. This is version 1.37; complete with plugins, graphical display of hit…

    …s, oligo finding and much more
    lstein committed Mar 31, 2002
Commits on Mar 25, 2002
Commits on Mar 24, 2002
Commits on Mar 19, 2002
Commits on Mar 12, 2002
Commits on Mar 6, 2002
  1. added help file

    lstein committed Mar 6, 2002
Commits on Feb 27, 2002
Commits on Feb 25, 2002
Commits on Feb 22, 2002
  1. release 1.34 coming up

    lstein committed Feb 22, 2002
Commits on Feb 21, 2002
  1. refactored image-generating code to allow for easier image generation…

    … by third-party code -- unfortunately it is still underdocumented, but look at the Bio::Graphics::Browser->render_html() call
    lstein committed Feb 21, 2002
Commits on Feb 20, 2002
  1. fixed problem with makefile that prevented button images from being i…

    …nstalled in correct place
    lstein committed Feb 20, 2002