diff --git a/lerna.json b/lerna.json index 1cd7bef50e..1f67f50dc6 100644 --- a/lerna.json +++ b/lerna.json @@ -1,5 +1,5 @@ { - "version": "2.12.2", + "version": "2.12.3", "npmClient": "yarn", "$schema": "node_modules/lerna/schemas/lerna-schema.json" } diff --git a/packages/app-core/package.json b/packages/app-core/package.json index 0e14c7ab75..d16cb39121 100644 --- a/packages/app-core/package.json +++ b/packages/app-core/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/app-core", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 code shared between the 'full featured' apps e.g. jbrowse-web and jbrowse-desktop", "keywords": [ "jbrowse", @@ -42,7 +42,7 @@ }, "dependencies": { "@babel/runtime": "^7.16.3", - "@jbrowse/product-core": "^2.12.2", + "@jbrowse/product-core": "^2.12.3", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "copy-to-clipboard": "^3.3.1", diff --git a/packages/core/package.json b/packages/core/package.json index 9a66e559a0..c8e1e7196a 100644 --- a/packages/core/package.json +++ b/packages/core/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/core", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 core libraries used by plugins", "keywords": [ "jbrowse", diff --git a/packages/embedded-core/package.json b/packages/embedded-core/package.json index d205f1cac6..65eaf85ccd 100644 --- a/packages/embedded-core/package.json +++ b/packages/embedded-core/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/embedded-core", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 code shared between embedded products", "keywords": [ "jbrowse", @@ -42,7 +42,7 @@ }, "dependencies": { "@babel/runtime": "^7.16.3", - "@jbrowse/product-core": "^2.12.2", + "@jbrowse/product-core": "^2.12.3", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "copy-to-clipboard": "^3.3.1", diff --git a/packages/product-core/package.json b/packages/product-core/package.json index 50f929dac1..d949e9db51 100644 --- a/packages/product-core/package.json +++ b/packages/product-core/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/product-core", - "version": "2.12.2", + "version": "2.12.3", "sideEffects": false, "description": "JBrowse 2 code shared between products but not used by plugins", "keywords": [ @@ -43,7 +43,7 @@ }, "dependencies": { "@babel/runtime": "^7.16.3", - "@jbrowse/core": "^2.12.2", + "@jbrowse/core": "^2.12.3", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "copy-to-clipboard": "^3.3.1", diff --git a/packages/text-indexing/package.json b/packages/text-indexing/package.json index 37530c6136..bd7186df62 100644 --- a/packages/text-indexing/package.json +++ b/packages/text-indexing/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/text-indexing", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 text indexing for desktop", "keywords": [ "jbrowse", diff --git a/packages/web-core/package.json b/packages/web-core/package.json index 212a75702a..789bcfe9bd 100644 --- a/packages/web-core/package.json +++ b/packages/web-core/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/web-core", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 code shared between web-app type products", "keywords": [ "jbrowse", @@ -42,8 +42,8 @@ }, "dependencies": { "@babel/runtime": "^7.16.3", - "@jbrowse/app-core": "^2.12.2", - "@jbrowse/product-core": "^2.12.2", + "@jbrowse/app-core": "^2.12.3", + "@jbrowse/product-core": "^2.12.3", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "clone": "^2.0.0", diff --git a/plugins/alignments/package.json b/plugins/alignments/package.json index 95f49247b4..8f3d4a3d70 100644 --- a/plugins/alignments/package.json +++ b/plugins/alignments/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-alignments", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 alignments adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/arc/package.json b/plugins/arc/package.json index 7c97609cc1..89e53d2a26 100644 --- a/plugins/arc/package.json +++ b/plugins/arc/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-arc", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 arc adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/authentication/package.json b/plugins/authentication/package.json index c5d7dd62db..589f6b0343 100644 --- a/plugins/authentication/package.json +++ b/plugins/authentication/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-authentication", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 Authentication", "keywords": [ "jbrowse", diff --git a/plugins/bed/package.json b/plugins/bed/package.json index b2abaefb05..bc1f00a24f 100644 --- a/plugins/bed/package.json +++ b/plugins/bed/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-bed", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 bed adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/breakpoint-split-view/package.json b/plugins/breakpoint-split-view/package.json index 89dcccbe78..a0205d7e57 100644 --- a/plugins/breakpoint-split-view/package.json +++ b/plugins/breakpoint-split-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-breakpoint-split-view", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 breakpoint detail split view", "keywords": [ "jbrowse", diff --git a/plugins/circular-view/package.json b/plugins/circular-view/package.json index a1d45d1f88..bde13a3db3 100644 --- a/plugins/circular-view/package.json +++ b/plugins/circular-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-circular-view", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 circular view", "keywords": [ "jbrowse", diff --git a/plugins/comparative-adapters/package.json b/plugins/comparative-adapters/package.json index 8fffc1355d..973641359c 100644 --- a/plugins/comparative-adapters/package.json +++ b/plugins/comparative-adapters/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-comparative-adapters", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 comparative adapters", "keywords": [ "jbrowse", diff --git a/plugins/config/package.json b/plugins/config/package.json index f3d53aae05..cf9f0e69b4 100644 --- a/plugins/config/package.json +++ b/plugins/config/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-config", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 config utilities", "keywords": [ "jbrowse", diff --git a/plugins/data-management/package.json b/plugins/data-management/package.json index bcf488aaf7..0945cbdd94 100644 --- a/plugins/data-management/package.json +++ b/plugins/data-management/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-data-management", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 linear genome view", "keywords": [ "jbrowse", diff --git a/plugins/dotplot-view/package.json b/plugins/dotplot-view/package.json index 9ed9a633a6..275122657a 100644 --- a/plugins/dotplot-view/package.json +++ b/plugins/dotplot-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-dotplot-view", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 dotplot view", "keywords": [ "jbrowse", diff --git a/plugins/gccontent/package.json b/plugins/gccontent/package.json index 506e02ca63..7dd6525417 100644 --- a/plugins/gccontent/package.json +++ b/plugins/gccontent/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-gccontent", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 gccontent concepts", "keywords": [ "jbrowse", diff --git a/plugins/gff3/package.json b/plugins/gff3/package.json index ccc7d220d9..802cc44120 100644 --- a/plugins/gff3/package.json +++ b/plugins/gff3/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-gff3", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 gff3.", "keywords": [ "jbrowse", diff --git a/plugins/grid-bookmark/package.json b/plugins/grid-bookmark/package.json index bacfb2ee7d..6826181f12 100644 --- a/plugins/grid-bookmark/package.json +++ b/plugins/grid-bookmark/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-grid-bookmark", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 grid bookmark widget", "keywords": [ "jbrowse", diff --git a/plugins/gtf/package.json b/plugins/gtf/package.json index ad39ac9371..ab6f9ca3c9 100644 --- a/plugins/gtf/package.json +++ b/plugins/gtf/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-gtf", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 gtf feature adapter", "keywords": [ "jbrowse", diff --git a/plugins/hic/package.json b/plugins/hic/package.json index 76d592d6f3..500c1ba44a 100644 --- a/plugins/hic/package.json +++ b/plugins/hic/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-hic", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 hic adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/jobs-management/package.json b/plugins/jobs-management/package.json index dd8ba4d8f2..cc9379bfc9 100644 --- a/plugins/jobs-management/package.json +++ b/plugins/jobs-management/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-jobs-management", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 jobs management", "keywords": [ "jbrowse", @@ -36,7 +36,7 @@ "clean": "rimraf dist esm *.tsbuildinfo" }, "dependencies": { - "@jbrowse/text-indexing": "^2.12.2", + "@jbrowse/text-indexing": "^2.12.3", "@mui/icons-material": "^5.0.0" }, "peerDependencies": { diff --git a/plugins/legacy-jbrowse/package.json b/plugins/legacy-jbrowse/package.json index 1882161101..01e066a3aa 100644 --- a/plugins/legacy-jbrowse/package.json +++ b/plugins/legacy-jbrowse/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-legacy-jbrowse", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 plugin for connecting to and reading JBrowse 1 data", "keywords": [ "jbrowse", diff --git a/plugins/linear-comparative-view/package.json b/plugins/linear-comparative-view/package.json index 6a91b854a4..98a03611ea 100644 --- a/plugins/linear-comparative-view/package.json +++ b/plugins/linear-comparative-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-linear-comparative-view", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 linear comparative view", "keywords": [ "jbrowse", diff --git a/plugins/linear-genome-view/package.json b/plugins/linear-genome-view/package.json index ad761d907b..bb155cc9cc 100644 --- a/plugins/linear-genome-view/package.json +++ b/plugins/linear-genome-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-linear-genome-view", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 linear genome view", "keywords": [ "jbrowse", diff --git a/plugins/lollipop/package.json b/plugins/lollipop/package.json index d460ca5835..c8fc6f8bce 100644 --- a/plugins/lollipop/package.json +++ b/plugins/lollipop/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-lollipop", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 plugin for lollipops", "keywords": [ "jbrowse", diff --git a/plugins/menus/package.json b/plugins/menus/package.json index 64d79475d0..7b6ce85038 100644 --- a/plugins/menus/package.json +++ b/plugins/menus/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-menus", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 basic menus", "keywords": [ "jbrowse", diff --git a/plugins/rdf/package.json b/plugins/rdf/package.json index 4b52a8d0e1..3bb2de2ea6 100644 --- a/plugins/rdf/package.json +++ b/plugins/rdf/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-rdf", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 RDF resources", "keywords": [ "jbrowse", diff --git a/plugins/sequence/package.json b/plugins/sequence/package.json index 2bf7fe1f24..9013ac4eee 100644 --- a/plugins/sequence/package.json +++ b/plugins/sequence/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-sequence", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 sequence adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/spreadsheet-view/package.json b/plugins/spreadsheet-view/package.json index d64ca13753..58797bb760 100644 --- a/plugins/spreadsheet-view/package.json +++ b/plugins/spreadsheet-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-spreadsheet-view", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 spreadsheet view", "keywords": [ "jbrowse", @@ -38,7 +38,7 @@ "dependencies": { "@gmod/bgzf-filehandle": "^1.4.3", "@gmod/vcf": "^5.0.9", - "@jbrowse/plugin-variants": "^2.12.2", + "@jbrowse/plugin-variants": "^2.12.3", "@mui/icons-material": "^5.0.1", "csvtojson": "^2.0.10" }, diff --git a/plugins/sv-inspector/package.json b/plugins/sv-inspector/package.json index 295bb2e012..29afc9d1fb 100644 --- a/plugins/sv-inspector/package.json +++ b/plugins/sv-inspector/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-sv-inspector", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 SV inspector view", "keywords": [ "jbrowse", diff --git a/plugins/svg/package.json b/plugins/svg/package.json index b85aa87768..45eeecd185 100644 --- a/plugins/svg/package.json +++ b/plugins/svg/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-svg", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 plugin for svg features", "keywords": [ "jbrowse", diff --git a/plugins/text-indexing/package.json b/plugins/text-indexing/package.json index 8aa6bf9544..ff869c62bd 100644 --- a/plugins/text-indexing/package.json +++ b/plugins/text-indexing/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-text-indexing", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 text indexing rpc method", "keywords": [ "jbrowse", @@ -36,7 +36,7 @@ "clean": "rimraf dist esm *.tsbuildinfo" }, "dependencies": { - "@jbrowse/text-indexing": "^2.12.2" + "@jbrowse/text-indexing": "^2.12.3" }, "peerDependencies": { "@jbrowse/core": "^2.0.0", diff --git a/plugins/trix/package.json b/plugins/trix/package.json index f1258188b5..3ddc6dfcd5 100644 --- a/plugins/trix/package.json +++ b/plugins/trix/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-trix", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 trix text search adapter", "keywords": [ "jbrowse", diff --git a/plugins/variants/package.json b/plugins/variants/package.json index 9f6f8f0ae6..6192359bf6 100644 --- a/plugins/variants/package.json +++ b/plugins/variants/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-variants", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 variant adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/wiggle/package.json b/plugins/wiggle/package.json index 41d5bc400e..b54beebc1d 100644 --- a/plugins/wiggle/package.json +++ b/plugins/wiggle/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-wiggle", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 wiggle adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/products/jbrowse-cli/README.md b/products/jbrowse-cli/README.md index 0a1eac7e82..95196bb3d6 100644 --- a/products/jbrowse-cli/README.md +++ b/products/jbrowse-cli/README.md @@ -205,7 +205,7 @@ EXAMPLES ``` _See code: -[src/commands/add-assembly.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.2/products/jbrowse-cli/src/commands/add-assembly.ts)_ +[src/commands/add-assembly.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.3/products/jbrowse-cli/src/commands/add-assembly.ts)_ ## `jbrowse add-connection CONNECTIONURLORPATH` @@ -256,7 +256,7 @@ EXAMPLES ``` _See code: -[src/commands/add-connection.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.2/products/jbrowse-cli/src/commands/add-connection.ts)_ +[src/commands/add-connection.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.3/products/jbrowse-cli/src/commands/add-connection.ts)_ ## `jbrowse add-track TRACK` @@ -337,7 +337,7 @@ EXAMPLES ``` _See code: -[src/commands/add-track.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.2/products/jbrowse-cli/src/commands/add-track.ts)_ +[src/commands/add-track.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.3/products/jbrowse-cli/src/commands/add-track.ts)_ ## `jbrowse add-track-json TRACK` @@ -367,7 +367,7 @@ EXAMPLES ``` _See code: -[src/commands/add-track-json.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.2/products/jbrowse-cli/src/commands/add-track-json.ts)_ +[src/commands/add-track-json.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.3/products/jbrowse-cli/src/commands/add-track-json.ts)_ ## `jbrowse admin-server` @@ -399,7 +399,7 @@ EXAMPLES ``` _See code: -[src/commands/admin-server.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.2/products/jbrowse-cli/src/commands/admin-server.ts)_ +[src/commands/admin-server.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.3/products/jbrowse-cli/src/commands/admin-server.ts)_ ## `jbrowse create LOCALPATH` @@ -456,7 +456,7 @@ EXAMPLES ``` _See code: -[src/commands/create.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.2/products/jbrowse-cli/src/commands/create.ts)_ +[src/commands/create.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.3/products/jbrowse-cli/src/commands/create.ts)_ ## `jbrowse help [COMMAND]` @@ -507,7 +507,7 @@ EXAMPLES ``` _See code: -[src/commands/make-pif.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.2/products/jbrowse-cli/src/commands/make-pif.ts)_ +[src/commands/make-pif.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.3/products/jbrowse-cli/src/commands/make-pif.ts)_ ## `jbrowse remove-track TRACK` @@ -535,7 +535,7 @@ EXAMPLES ``` _See code: -[src/commands/remove-track.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.2/products/jbrowse-cli/src/commands/remove-track.ts)_ +[src/commands/remove-track.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.3/products/jbrowse-cli/src/commands/remove-track.ts)_ ## `jbrowse set-default-session` @@ -577,7 +577,7 @@ EXAMPLES ``` _See code: -[src/commands/set-default-session.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.2/products/jbrowse-cli/src/commands/set-default-session.ts)_ +[src/commands/set-default-session.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.3/products/jbrowse-cli/src/commands/set-default-session.ts)_ ## `jbrowse sort-gff FILE` @@ -608,7 +608,7 @@ EXAMPLES ``` _See code: -[src/commands/sort-gff.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.2/products/jbrowse-cli/src/commands/sort-gff.ts)_ +[src/commands/sort-gff.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.3/products/jbrowse-cli/src/commands/sort-gff.ts)_ ## `jbrowse text-index` @@ -675,7 +675,7 @@ EXAMPLES ``` _See code: -[src/commands/text-index.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.2/products/jbrowse-cli/src/commands/text-index.ts)_ +[src/commands/text-index.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.3/products/jbrowse-cli/src/commands/text-index.ts)_ ## `jbrowse upgrade [LOCALPATH]` @@ -738,7 +738,7 @@ EXAMPLES ``` _See code: -[src/commands/upgrade.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.2/products/jbrowse-cli/src/commands/upgrade.ts)_ +[src/commands/upgrade.ts](https://github.com/GMOD/jbrowse-components/blob/v2.12.3/products/jbrowse-cli/src/commands/upgrade.ts)_ diff --git a/products/jbrowse-cli/package.json b/products/jbrowse-cli/package.json index 13734b5b09..760533bb70 100644 --- a/products/jbrowse-cli/package.json +++ b/products/jbrowse-cli/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/cli", - "version": "2.12.2", + "version": "2.12.3", "description": "A command line tool for working with JBrowse 2", "keywords": [ "jbrowse", diff --git a/products/jbrowse-desktop/package.json b/products/jbrowse-desktop/package.json index ca12622ef5..173d134ea2 100644 --- a/products/jbrowse-desktop/package.json +++ b/products/jbrowse-desktop/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/desktop", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse desktop application specialized to inspect structural variants", "license": "Apache-2.0", "homepage": "./", @@ -42,40 +42,40 @@ "@emotion/react": "^11.9.0", "@fontsource/roboto": "^5.0.2", "@gmod/faidx": "^1.0.1", - "@jbrowse/app-core": "^2.12.2", - "@jbrowse/core": "^2.12.2", - "@jbrowse/plugin-alignments": "^2.12.2", - "@jbrowse/plugin-arc": "^2.12.2", - "@jbrowse/plugin-authentication": "^2.12.2", - "@jbrowse/plugin-bed": "^2.12.2", - "@jbrowse/plugin-breakpoint-split-view": "^2.12.2", - "@jbrowse/plugin-circular-view": "^2.12.2", - "@jbrowse/plugin-comparative-adapters": "^2.12.2", - "@jbrowse/plugin-config": "^2.12.2", - "@jbrowse/plugin-data-management": "^2.12.2", - "@jbrowse/plugin-dotplot-view": "^2.12.2", - "@jbrowse/plugin-gccontent": "^2.12.2", - "@jbrowse/plugin-gff3": "^2.12.2", - "@jbrowse/plugin-grid-bookmark": "^2.12.2", - "@jbrowse/plugin-gtf": "^2.12.2", - "@jbrowse/plugin-hic": "^2.12.2", - "@jbrowse/plugin-jobs-management": "^2.12.2", - "@jbrowse/plugin-legacy-jbrowse": "^2.12.2", - "@jbrowse/plugin-linear-comparative-view": "^2.12.2", - "@jbrowse/plugin-linear-genome-view": "^2.12.2", - "@jbrowse/plugin-lollipop": "^2.12.2", - "@jbrowse/plugin-menus": "^2.12.2", - "@jbrowse/plugin-rdf": "^2.12.2", - "@jbrowse/plugin-sequence": "^2.12.2", - "@jbrowse/plugin-spreadsheet-view": "^2.12.2", - "@jbrowse/plugin-sv-inspector": "^2.12.2", - "@jbrowse/plugin-svg": "^2.12.2", - "@jbrowse/plugin-text-indexing": "^2.12.2", - "@jbrowse/plugin-trix": "^2.12.2", - "@jbrowse/plugin-variants": "^2.12.2", - "@jbrowse/plugin-wiggle": "^2.12.2", - "@jbrowse/product-core": "^2.12.2", - "@jbrowse/text-indexing": "^2.12.2", + "@jbrowse/app-core": "^2.12.3", + "@jbrowse/core": "^2.12.3", + "@jbrowse/plugin-alignments": "^2.12.3", + "@jbrowse/plugin-arc": "^2.12.3", + "@jbrowse/plugin-authentication": "^2.12.3", + "@jbrowse/plugin-bed": "^2.12.3", + "@jbrowse/plugin-breakpoint-split-view": "^2.12.3", + "@jbrowse/plugin-circular-view": "^2.12.3", + "@jbrowse/plugin-comparative-adapters": "^2.12.3", + "@jbrowse/plugin-config": "^2.12.3", + "@jbrowse/plugin-data-management": "^2.12.3", + "@jbrowse/plugin-dotplot-view": "^2.12.3", + "@jbrowse/plugin-gccontent": "^2.12.3", + "@jbrowse/plugin-gff3": "^2.12.3", + "@jbrowse/plugin-grid-bookmark": "^2.12.3", + "@jbrowse/plugin-gtf": "^2.12.3", + "@jbrowse/plugin-hic": "^2.12.3", + "@jbrowse/plugin-jobs-management": "^2.12.3", + "@jbrowse/plugin-legacy-jbrowse": "^2.12.3", + "@jbrowse/plugin-linear-comparative-view": "^2.12.3", + "@jbrowse/plugin-linear-genome-view": "^2.12.3", + "@jbrowse/plugin-lollipop": "^2.12.3", + "@jbrowse/plugin-menus": "^2.12.3", + "@jbrowse/plugin-rdf": "^2.12.3", + "@jbrowse/plugin-sequence": "^2.12.3", + "@jbrowse/plugin-spreadsheet-view": "^2.12.3", + "@jbrowse/plugin-sv-inspector": "^2.12.3", + "@jbrowse/plugin-svg": "^2.12.3", + "@jbrowse/plugin-text-indexing": "^2.12.3", + "@jbrowse/plugin-trix": "^2.12.3", + "@jbrowse/plugin-variants": "^2.12.3", + "@jbrowse/plugin-wiggle": "^2.12.3", + "@jbrowse/product-core": "^2.12.3", + "@jbrowse/text-indexing": "^2.12.3", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "@mui/x-data-grid": "^7.0.0", diff --git a/products/jbrowse-img/package.json b/products/jbrowse-img/package.json index 61f587c4cf..71290f359a 100644 --- a/products/jbrowse-img/package.json +++ b/products/jbrowse-img/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/img", - "version": "2.12.2", + "version": "2.12.3", "main": "dist/index.js", "module": "esm/index.js", "author": "JBrowse Team", @@ -27,8 +27,8 @@ "@babel/runtime": "^7.17.9", "@emotion/cache": "^11.7.1", "@emotion/react": "^11.9.0", - "@jbrowse/plugin-linear-genome-view": "^2.12.2", - "@jbrowse/react-linear-genome-view": "^2.12.2", + "@jbrowse/plugin-linear-genome-view": "^2.12.3", + "@jbrowse/react-linear-genome-view": "^2.12.3", "canvas": "^2.9.1", "jsdom": "^24.0.0", "mobx": "^6.6.0", diff --git a/products/jbrowse-predefined-sessions/package.json b/products/jbrowse-predefined-sessions/package.json index ef8912b84f..e3e784669c 100644 --- a/products/jbrowse-predefined-sessions/package.json +++ b/products/jbrowse-predefined-sessions/package.json @@ -1,6 +1,6 @@ { "name": "jbrowse-predefined-sessions", - "version": "2.12.2", + "version": "2.12.3", "main": "index.js", "author": "JBrowse Team", "license": "MIT", diff --git a/products/jbrowse-react-app/package.json b/products/jbrowse-react-app/package.json index 77f96fc050..f5dcedb981 100644 --- a/products/jbrowse-react-app/package.json +++ b/products/jbrowse-react-app/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/react-app", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 app React component", "keywords": [ "jbrowse", @@ -48,38 +48,38 @@ "@emotion/cache": "^11.7.1", "@emotion/react": "^11.9.0", "@emotion/styled": "^11.8.1", - "@jbrowse/app-core": "^2.12.2", - "@jbrowse/core": "^2.12.2", - "@jbrowse/plugin-alignments": "^2.12.2", - "@jbrowse/plugin-arc": "^2.12.2", - "@jbrowse/plugin-authentication": "^2.12.2", - "@jbrowse/plugin-bed": "^2.12.2", - "@jbrowse/plugin-breakpoint-split-view": "^2.12.2", - "@jbrowse/plugin-circular-view": "^2.12.2", - "@jbrowse/plugin-comparative-adapters": "^2.12.2", - "@jbrowse/plugin-config": "^2.12.2", - "@jbrowse/plugin-data-management": "^2.12.2", - "@jbrowse/plugin-dotplot-view": "^2.12.2", - "@jbrowse/plugin-gccontent": "^2.12.2", - "@jbrowse/plugin-gff3": "^2.12.2", - "@jbrowse/plugin-grid-bookmark": "^2.12.2", - "@jbrowse/plugin-gtf": "^2.12.2", - "@jbrowse/plugin-hic": "^2.12.2", - "@jbrowse/plugin-legacy-jbrowse": "^2.12.2", - "@jbrowse/plugin-linear-comparative-view": "^2.12.2", - "@jbrowse/plugin-linear-genome-view": "^2.12.2", - "@jbrowse/plugin-lollipop": "^2.12.2", - "@jbrowse/plugin-menus": "^2.12.2", - "@jbrowse/plugin-rdf": "^2.12.2", - "@jbrowse/plugin-sequence": "^2.12.2", - "@jbrowse/plugin-spreadsheet-view": "^2.12.2", - "@jbrowse/plugin-sv-inspector": "^2.12.2", - "@jbrowse/plugin-svg": "^2.12.2", - "@jbrowse/plugin-trix": "^2.12.2", - "@jbrowse/plugin-variants": "^2.12.2", - "@jbrowse/plugin-wiggle": "^2.12.2", - "@jbrowse/product-core": "^2.12.2", - "@jbrowse/web-core": "^2.12.2", + "@jbrowse/app-core": "^2.12.3", + "@jbrowse/core": "^2.12.3", + "@jbrowse/plugin-alignments": "^2.12.3", + "@jbrowse/plugin-arc": "^2.12.3", + "@jbrowse/plugin-authentication": "^2.12.3", + "@jbrowse/plugin-bed": "^2.12.3", + "@jbrowse/plugin-breakpoint-split-view": "^2.12.3", + "@jbrowse/plugin-circular-view": "^2.12.3", + "@jbrowse/plugin-comparative-adapters": "^2.12.3", + "@jbrowse/plugin-config": "^2.12.3", + "@jbrowse/plugin-data-management": "^2.12.3", + "@jbrowse/plugin-dotplot-view": "^2.12.3", + "@jbrowse/plugin-gccontent": "^2.12.3", + "@jbrowse/plugin-gff3": "^2.12.3", + "@jbrowse/plugin-grid-bookmark": "^2.12.3", + "@jbrowse/plugin-gtf": "^2.12.3", + "@jbrowse/plugin-hic": "^2.12.3", + "@jbrowse/plugin-legacy-jbrowse": "^2.12.3", + "@jbrowse/plugin-linear-comparative-view": "^2.12.3", + "@jbrowse/plugin-linear-genome-view": "^2.12.3", + "@jbrowse/plugin-lollipop": "^2.12.3", + "@jbrowse/plugin-menus": "^2.12.3", + "@jbrowse/plugin-rdf": "^2.12.3", + "@jbrowse/plugin-sequence": "^2.12.3", + "@jbrowse/plugin-spreadsheet-view": "^2.12.3", + "@jbrowse/plugin-sv-inspector": "^2.12.3", + "@jbrowse/plugin-svg": "^2.12.3", + "@jbrowse/plugin-trix": "^2.12.3", + "@jbrowse/plugin-variants": "^2.12.3", + "@jbrowse/plugin-wiggle": "^2.12.3", + "@jbrowse/product-core": "^2.12.3", + "@jbrowse/web-core": "^2.12.3", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "base64-js": "^1.0.0", diff --git a/products/jbrowse-react-circular-genome-view/package.json b/products/jbrowse-react-circular-genome-view/package.json index ee42f98af2..7a6ee09b2d 100644 --- a/products/jbrowse-react-circular-genome-view/package.json +++ b/products/jbrowse-react-circular-genome-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/react-circular-genome-view", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 circular genome view React component", "keywords": [ "jbrowse", @@ -41,17 +41,17 @@ "@emotion/cache": "^11.7.1", "@emotion/react": "^11.9.0", "@emotion/styled": "^11.8.1", - "@jbrowse/core": "^2.12.2", - "@jbrowse/embedded-core": "^2.12.2", - "@jbrowse/plugin-authentication": "^2.12.2", - "@jbrowse/plugin-circular-view": "^2.12.2", - "@jbrowse/plugin-config": "^2.12.2", - "@jbrowse/plugin-data-management": "^2.12.2", - "@jbrowse/plugin-linear-genome-view": "^2.12.2", - "@jbrowse/plugin-sequence": "^2.12.2", - "@jbrowse/plugin-variants": "^2.12.2", - "@jbrowse/plugin-wiggle": "^2.12.2", - "@jbrowse/product-core": "^2.12.2", + "@jbrowse/core": "^2.12.3", + "@jbrowse/embedded-core": "^2.12.3", + "@jbrowse/plugin-authentication": "^2.12.3", + "@jbrowse/plugin-circular-view": "^2.12.3", + "@jbrowse/plugin-config": "^2.12.3", + "@jbrowse/plugin-data-management": "^2.12.3", + "@jbrowse/plugin-linear-genome-view": "^2.12.3", + "@jbrowse/plugin-sequence": "^2.12.3", + "@jbrowse/plugin-variants": "^2.12.3", + "@jbrowse/plugin-wiggle": "^2.12.3", + "@jbrowse/product-core": "^2.12.3", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "mobx": "^6.6.0", diff --git a/products/jbrowse-react-linear-genome-view/package.json b/products/jbrowse-react-linear-genome-view/package.json index 82004c0322..7f3a43ac03 100644 --- a/products/jbrowse-react-linear-genome-view/package.json +++ b/products/jbrowse-react-linear-genome-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/react-linear-genome-view", - "version": "2.12.2", + "version": "2.12.3", "description": "JBrowse 2 linear genome view React component", "keywords": [ "jbrowse", @@ -48,25 +48,25 @@ "@emotion/cache": "^11.7.1", "@emotion/react": "^11.9.0", "@emotion/styled": "^11.8.1", - "@jbrowse/core": "^2.12.2", - "@jbrowse/embedded-core": "^2.12.2", - "@jbrowse/plugin-alignments": "^2.12.2", - "@jbrowse/plugin-arc": "^2.12.2", - "@jbrowse/plugin-authentication": "^2.12.2", - "@jbrowse/plugin-bed": "^2.12.2", - "@jbrowse/plugin-circular-view": "^2.12.2", - "@jbrowse/plugin-config": "^2.12.2", - "@jbrowse/plugin-data-management": "^2.12.2", - "@jbrowse/plugin-gccontent": "^2.12.2", - "@jbrowse/plugin-gff3": "^2.12.2", - "@jbrowse/plugin-legacy-jbrowse": "^2.12.2", - "@jbrowse/plugin-linear-genome-view": "^2.12.2", - "@jbrowse/plugin-sequence": "^2.12.2", - "@jbrowse/plugin-svg": "^2.12.2", - "@jbrowse/plugin-trix": "^2.12.2", - "@jbrowse/plugin-variants": "^2.12.2", - "@jbrowse/plugin-wiggle": "^2.12.2", - "@jbrowse/product-core": "^2.12.2", + "@jbrowse/core": "^2.12.3", + "@jbrowse/embedded-core": "^2.12.3", + "@jbrowse/plugin-alignments": "^2.12.3", + "@jbrowse/plugin-arc": "^2.12.3", + "@jbrowse/plugin-authentication": "^2.12.3", + "@jbrowse/plugin-bed": "^2.12.3", + "@jbrowse/plugin-circular-view": "^2.12.3", + "@jbrowse/plugin-config": "^2.12.3", + "@jbrowse/plugin-data-management": "^2.12.3", + "@jbrowse/plugin-gccontent": "^2.12.3", + "@jbrowse/plugin-gff3": "^2.12.3", + "@jbrowse/plugin-legacy-jbrowse": "^2.12.3", + "@jbrowse/plugin-linear-genome-view": "^2.12.3", + "@jbrowse/plugin-sequence": "^2.12.3", + "@jbrowse/plugin-svg": "^2.12.3", + "@jbrowse/plugin-trix": "^2.12.3", + "@jbrowse/plugin-variants": "^2.12.3", + "@jbrowse/plugin-wiggle": "^2.12.3", + "@jbrowse/product-core": "^2.12.3", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "mobx": "^6.6.0", diff --git a/products/jbrowse-web/package.json b/products/jbrowse-web/package.json index 3c256778c4..89d0e466f6 100644 --- a/products/jbrowse-web/package.json +++ b/products/jbrowse-web/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/web", - "version": "2.12.2", + "version": "2.12.3", "license": "Apache-2.0", "homepage": ".", "main": "build", @@ -15,38 +15,38 @@ }, "dependencies": { "@fontsource/roboto": "^5.0.2", - "@jbrowse/app-core": "^2.12.2", - "@jbrowse/core": "^2.12.2", - "@jbrowse/plugin-alignments": "^2.12.2", - "@jbrowse/plugin-arc": "^2.12.2", - "@jbrowse/plugin-authentication": "^2.12.2", - "@jbrowse/plugin-bed": "^2.12.2", - "@jbrowse/plugin-breakpoint-split-view": "^2.12.2", - "@jbrowse/plugin-circular-view": "^2.12.2", - "@jbrowse/plugin-comparative-adapters": "^2.12.2", - "@jbrowse/plugin-config": "^2.12.2", - "@jbrowse/plugin-data-management": "^2.12.2", - "@jbrowse/plugin-dotplot-view": "^2.12.2", - "@jbrowse/plugin-gccontent": "^2.12.2", - "@jbrowse/plugin-gff3": "^2.12.2", - "@jbrowse/plugin-grid-bookmark": "^2.12.2", - "@jbrowse/plugin-gtf": "^2.12.2", - "@jbrowse/plugin-hic": "^2.12.2", - "@jbrowse/plugin-legacy-jbrowse": "^2.12.2", - "@jbrowse/plugin-linear-comparative-view": "^2.12.2", - "@jbrowse/plugin-linear-genome-view": "^2.12.2", - "@jbrowse/plugin-lollipop": "^2.12.2", - "@jbrowse/plugin-menus": "^2.12.2", - "@jbrowse/plugin-rdf": "^2.12.2", - "@jbrowse/plugin-sequence": "^2.12.2", - "@jbrowse/plugin-spreadsheet-view": "^2.12.2", - "@jbrowse/plugin-sv-inspector": "^2.12.2", - "@jbrowse/plugin-svg": "^2.12.2", - "@jbrowse/plugin-trix": "^2.12.2", - "@jbrowse/plugin-variants": "^2.12.2", - "@jbrowse/plugin-wiggle": "^2.12.2", - "@jbrowse/product-core": "^2.12.2", - "@jbrowse/web-core": "^2.12.2", + "@jbrowse/app-core": "^2.12.3", + "@jbrowse/core": "^2.12.3", + "@jbrowse/plugin-alignments": "^2.12.3", + "@jbrowse/plugin-arc": "^2.12.3", + "@jbrowse/plugin-authentication": "^2.12.3", + "@jbrowse/plugin-bed": "^2.12.3", + "@jbrowse/plugin-breakpoint-split-view": "^2.12.3", + "@jbrowse/plugin-circular-view": "^2.12.3", + "@jbrowse/plugin-comparative-adapters": "^2.12.3", + "@jbrowse/plugin-config": "^2.12.3", + "@jbrowse/plugin-data-management": "^2.12.3", + "@jbrowse/plugin-dotplot-view": "^2.12.3", + "@jbrowse/plugin-gccontent": "^2.12.3", + "@jbrowse/plugin-gff3": "^2.12.3", + "@jbrowse/plugin-grid-bookmark": "^2.12.3", + "@jbrowse/plugin-gtf": "^2.12.3", + "@jbrowse/plugin-hic": "^2.12.3", + "@jbrowse/plugin-legacy-jbrowse": "^2.12.3", + "@jbrowse/plugin-linear-comparative-view": "^2.12.3", + "@jbrowse/plugin-linear-genome-view": "^2.12.3", + "@jbrowse/plugin-lollipop": "^2.12.3", + "@jbrowse/plugin-menus": "^2.12.3", + "@jbrowse/plugin-rdf": "^2.12.3", + "@jbrowse/plugin-sequence": "^2.12.3", + "@jbrowse/plugin-spreadsheet-view": "^2.12.3", + "@jbrowse/plugin-sv-inspector": "^2.12.3", + "@jbrowse/plugin-svg": "^2.12.3", + "@jbrowse/plugin-trix": "^2.12.3", + "@jbrowse/plugin-variants": "^2.12.3", + "@jbrowse/plugin-wiggle": "^2.12.3", + "@jbrowse/product-core": "^2.12.3", + "@jbrowse/web-core": "^2.12.3", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "@mui/x-data-grid": "^7.0.0",