diff --git a/lerna.json b/lerna.json index 49c34af7e1..78fe9ac589 100644 --- a/lerna.json +++ b/lerna.json @@ -1,5 +1,5 @@ { - "version": "2.2.1", + "version": "2.2.2", "npmClient": "yarn", "useWorkspaces": true } diff --git a/packages/core/package.json b/packages/core/package.json index 07eda6e684..dd91078af7 100644 --- a/packages/core/package.json +++ b/packages/core/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/core", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 core libraries used by plugins", "keywords": [ "jbrowse", diff --git a/packages/text-indexing/package.json b/packages/text-indexing/package.json index 19663ed924..3fff683412 100644 --- a/packages/text-indexing/package.json +++ b/packages/text-indexing/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/text-indexing", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 text indexing for desktop", "keywords": [ "jbrowse", diff --git a/plugins/alignments/package.json b/plugins/alignments/package.json index 32f5624297..02b8c7f1b1 100644 --- a/plugins/alignments/package.json +++ b/plugins/alignments/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-alignments", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 alignments adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/arc/package.json b/plugins/arc/package.json index 8b138ea489..4c9fa7a7be 100644 --- a/plugins/arc/package.json +++ b/plugins/arc/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-arc", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 arc adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/authentication/package.json b/plugins/authentication/package.json index 337f4f110c..e3cc16b9dd 100644 --- a/plugins/authentication/package.json +++ b/plugins/authentication/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-authentication", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 Authentication", "keywords": [ "jbrowse", diff --git a/plugins/bed/package.json b/plugins/bed/package.json index c0082ead39..e9bbf89392 100644 --- a/plugins/bed/package.json +++ b/plugins/bed/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-bed", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 bed adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/breakpoint-split-view/package.json b/plugins/breakpoint-split-view/package.json index f99d2ebcd9..621b0cd9bf 100644 --- a/plugins/breakpoint-split-view/package.json +++ b/plugins/breakpoint-split-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-breakpoint-split-view", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 breakpoint detail split view", "keywords": [ "jbrowse", diff --git a/plugins/circular-view/package.json b/plugins/circular-view/package.json index 9322d70e00..9e5f9d4392 100644 --- a/plugins/circular-view/package.json +++ b/plugins/circular-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-circular-view", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 circular view", "keywords": [ "jbrowse", diff --git a/plugins/comparative-adapters/package.json b/plugins/comparative-adapters/package.json index 0270a2f2ac..4afc9b1701 100644 --- a/plugins/comparative-adapters/package.json +++ b/plugins/comparative-adapters/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-comparative-adapters", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 comparative adapters", "keywords": [ "jbrowse", diff --git a/plugins/config/package.json b/plugins/config/package.json index 7f2580a171..f880d590ee 100644 --- a/plugins/config/package.json +++ b/plugins/config/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-config", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 config utilities", "keywords": [ "jbrowse", diff --git a/plugins/data-management/package.json b/plugins/data-management/package.json index 08eba46009..12848c7484 100644 --- a/plugins/data-management/package.json +++ b/plugins/data-management/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-data-management", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 linear genome view", "keywords": [ "jbrowse", diff --git a/plugins/dotplot-view/package.json b/plugins/dotplot-view/package.json index 7c00e68e2a..aa24cf8440 100644 --- a/plugins/dotplot-view/package.json +++ b/plugins/dotplot-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-dotplot-view", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 dotplot view", "keywords": [ "jbrowse", diff --git a/plugins/gccontent/package.json b/plugins/gccontent/package.json index 4de469d6ea..f17a70501a 100644 --- a/plugins/gccontent/package.json +++ b/plugins/gccontent/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-gccontent", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 gccontent concepts", "keywords": [ "jbrowse", diff --git a/plugins/gff3/package.json b/plugins/gff3/package.json index 4b7d28d72d..f0cdaed13b 100644 --- a/plugins/gff3/package.json +++ b/plugins/gff3/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-gff3", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 gff3.", "keywords": [ "jbrowse", diff --git a/plugins/grid-bookmark/package.json b/plugins/grid-bookmark/package.json index e68eef6edf..1e8dae813d 100644 --- a/plugins/grid-bookmark/package.json +++ b/plugins/grid-bookmark/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-grid-bookmark", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 grid bookmark widget", "keywords": [ "jbrowse", diff --git a/plugins/gtf/package.json b/plugins/gtf/package.json index ee8ff51d88..f82da0df3d 100644 --- a/plugins/gtf/package.json +++ b/plugins/gtf/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-gtf", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 gtf feature adapter", "keywords": [ "jbrowse", diff --git a/plugins/hic/package.json b/plugins/hic/package.json index de1e152dd3..da6e2d7d3e 100644 --- a/plugins/hic/package.json +++ b/plugins/hic/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-hic", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 hic adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/jobs-management/package.json b/plugins/jobs-management/package.json index ec5185e9d2..fff1a7729f 100644 --- a/plugins/jobs-management/package.json +++ b/plugins/jobs-management/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-jobs-management", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 jobs management", "keywords": [ "jbrowse", @@ -37,7 +37,7 @@ "clean": "rimraf dist esm *.tsbuildinfo" }, "dependencies": { - "@jbrowse/text-indexing": "^2.2.1", + "@jbrowse/text-indexing": "^2.2.2", "@mui/icons-material": "^5.0.0" }, "peerDependencies": { diff --git a/plugins/legacy-jbrowse/package.json b/plugins/legacy-jbrowse/package.json index 5b7e74dc77..53fe6e262f 100644 --- a/plugins/legacy-jbrowse/package.json +++ b/plugins/legacy-jbrowse/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-legacy-jbrowse", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 plugin for connecting to and reading JBrowse 1 data", "keywords": [ "jbrowse", diff --git a/plugins/linear-comparative-view/package.json b/plugins/linear-comparative-view/package.json index 8b8703bc9d..4e03efbcd1 100644 --- a/plugins/linear-comparative-view/package.json +++ b/plugins/linear-comparative-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-linear-comparative-view", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 linear comparative view", "keywords": [ "jbrowse", diff --git a/plugins/linear-genome-view/package.json b/plugins/linear-genome-view/package.json index 92bac0191e..ed268ccb37 100644 --- a/plugins/linear-genome-view/package.json +++ b/plugins/linear-genome-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-linear-genome-view", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 linear genome view", "keywords": [ "jbrowse", diff --git a/plugins/lollipop/package.json b/plugins/lollipop/package.json index 11b8e4d850..e459cb3904 100644 --- a/plugins/lollipop/package.json +++ b/plugins/lollipop/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-lollipop", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 plugin for lollipops", "keywords": [ "jbrowse", diff --git a/plugins/menus/package.json b/plugins/menus/package.json index d1a8a636a9..30c26287e7 100644 --- a/plugins/menus/package.json +++ b/plugins/menus/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-menus", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 basic menus", "keywords": [ "jbrowse", diff --git a/plugins/protein/package.json b/plugins/protein/package.json index d0aa58c217..c71f97fe24 100644 --- a/plugins/protein/package.json +++ b/plugins/protein/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-protein", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 protein-specific renderers, etc.", "keywords": [ "jbrowse", diff --git a/plugins/rdf/package.json b/plugins/rdf/package.json index 7f4a2db87e..dbbdee7cb1 100644 --- a/plugins/rdf/package.json +++ b/plugins/rdf/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-rdf", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 RDF resources", "keywords": [ "jbrowse", diff --git a/plugins/sequence/package.json b/plugins/sequence/package.json index 850a148de3..e2ca69c1e4 100644 --- a/plugins/sequence/package.json +++ b/plugins/sequence/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-sequence", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 sequence adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/spreadsheet-view/package.json b/plugins/spreadsheet-view/package.json index 082f46ece7..275c24b1c8 100644 --- a/plugins/spreadsheet-view/package.json +++ b/plugins/spreadsheet-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-spreadsheet-view", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 spreadsheet view", "keywords": [ "jbrowse", @@ -39,7 +39,7 @@ "dependencies": { "@gmod/bgzf-filehandle": "^1.4.3", "@gmod/vcf": "^5.0.9", - "@jbrowse/plugin-variants": "^2.2.1", + "@jbrowse/plugin-variants": "^2.2.2", "@mui/icons-material": "^5.0.1", "csvtojson": "^2.0.10" }, diff --git a/plugins/sv-inspector/package.json b/plugins/sv-inspector/package.json index abbc281841..61a2518a60 100644 --- a/plugins/sv-inspector/package.json +++ b/plugins/sv-inspector/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-sv-inspector", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 SV inspector view", "keywords": [ "jbrowse", diff --git a/plugins/svg/package.json b/plugins/svg/package.json index e8da5f817b..75585e0bce 100644 --- a/plugins/svg/package.json +++ b/plugins/svg/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-svg", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 plugin for svg features", "keywords": [ "jbrowse", diff --git a/plugins/text-indexing/package.json b/plugins/text-indexing/package.json index 3896b83693..54cf0a60d4 100644 --- a/plugins/text-indexing/package.json +++ b/plugins/text-indexing/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-text-indexing", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 text indexing rpc method", "keywords": [ "jbrowse", @@ -37,7 +37,7 @@ "clean": "rimraf dist esm *.tsbuildinfo" }, "dependencies": { - "@jbrowse/text-indexing": "^2.2.1" + "@jbrowse/text-indexing": "^2.2.2" }, "peerDependencies": { "@jbrowse/core": "^2.0.0", diff --git a/plugins/trackhub-registry/package.json b/plugins/trackhub-registry/package.json index 04a9f9456e..26454cfdec 100644 --- a/plugins/trackhub-registry/package.json +++ b/plugins/trackhub-registry/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-trackhub-registry", - "version": "2.2.1", + "version": "2.2.2", "description": "Add a connection to The Track Hub Registry", "keywords": [ "jbrowse", diff --git a/plugins/trix/package.json b/plugins/trix/package.json index 6877209ab0..8ec32d9089 100644 --- a/plugins/trix/package.json +++ b/plugins/trix/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-trix", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 trix text search adapter", "keywords": [ "jbrowse", diff --git a/plugins/variants/package.json b/plugins/variants/package.json index 18d49088e6..6c7933dfc2 100644 --- a/plugins/variants/package.json +++ b/plugins/variants/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-variants", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 variant adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/wiggle/package.json b/plugins/wiggle/package.json index 9e240e7759..848f0db2d5 100644 --- a/plugins/wiggle/package.json +++ b/plugins/wiggle/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-wiggle", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 wiggle adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/products/jbrowse-cli/README.md b/products/jbrowse-cli/README.md index 6f6158d62b..f73f3dd32b 100644 --- a/products/jbrowse-cli/README.md +++ b/products/jbrowse-cli/README.md @@ -171,7 +171,7 @@ EXAMPLES $ jbrowse add-assembly myfile.fa.gz --load copy ``` -_See code: [src/commands/add-assembly.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.1/products/jbrowse-cli/src/commands/add-assembly.ts)_ +_See code: [src/commands/add-assembly.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.2/products/jbrowse-cli/src/commands/add-assembly.ts)_ ## `jbrowse add-connection CONNECTIONURLORPATH` @@ -225,7 +225,7 @@ EXAMPLES /path/to/jb2/installation/config.json ``` -_See code: [src/commands/add-connection.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.1/products/jbrowse-cli/src/commands/add-connection.ts)_ +_See code: [src/commands/add-connection.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.2/products/jbrowse-cli/src/commands/add-connection.ts)_ ## `jbrowse add-track TRACK` @@ -299,7 +299,7 @@ EXAMPLES $ jbrowse add-track /url/relative/path.bam --load inPlace ``` -_See code: [src/commands/add-track.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.1/products/jbrowse-cli/src/commands/add-track.ts)_ +_See code: [src/commands/add-track.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.2/products/jbrowse-cli/src/commands/add-track.ts)_ ## `jbrowse add-track-json TRACK` @@ -324,7 +324,7 @@ EXAMPLES $ jbrowse add-track-json track.json --update ``` -_See code: [src/commands/add-track-json.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.1/products/jbrowse-cli/src/commands/add-track-json.ts)_ +_See code: [src/commands/add-track-json.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.2/products/jbrowse-cli/src/commands/add-track-json.ts)_ ## `jbrowse admin-server` @@ -354,7 +354,7 @@ EXAMPLES $ jbrowse admin-server -p 8888 ``` -_See code: [src/commands/admin-server.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.1/products/jbrowse-cli/src/commands/admin-server.ts)_ +_See code: [src/commands/admin-server.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.2/products/jbrowse-cli/src/commands/admin-server.ts)_ ## `jbrowse create LOCALPATH` @@ -398,7 +398,7 @@ EXAMPLES $ jbrowse create --listVersions ``` -_See code: [src/commands/create.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.1/products/jbrowse-cli/src/commands/create.ts)_ +_See code: [src/commands/create.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.2/products/jbrowse-cli/src/commands/create.ts)_ ## `jbrowse help [COMMAND]` @@ -438,7 +438,7 @@ EXAMPLE $ jbrowse remove-track-json trackId ``` -_See code: [src/commands/remove-track.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.1/products/jbrowse-cli/src/commands/remove-track.ts)_ +_See code: [src/commands/remove-track.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.2/products/jbrowse-cli/src/commands/remove-track.ts)_ ## `jbrowse set-default-session` @@ -475,7 +475,7 @@ EXAMPLES $ jbrowse set-default-session --currentSession # Prints out current default session ``` -_See code: [src/commands/set-default-session.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.1/products/jbrowse-cli/src/commands/set-default-session.ts)_ +_See code: [src/commands/set-default-session.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.2/products/jbrowse-cli/src/commands/set-default-session.ts)_ ## `jbrowse text-index` @@ -536,7 +536,7 @@ EXAMPLES $ jbrowse text-index --file myfile.gff3.gz --file myfile.vcfgz --out indexes ``` -_See code: [src/commands/text-index.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.1/products/jbrowse-cli/src/commands/text-index.ts)_ +_See code: [src/commands/text-index.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.2/products/jbrowse-cli/src/commands/text-index.ts)_ ## `jbrowse upgrade [LOCALPATH]` @@ -584,7 +584,7 @@ EXAMPLES $ jbrowse upgrade --nightly ``` -_See code: [src/commands/upgrade.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.1/products/jbrowse-cli/src/commands/upgrade.ts)_ +_See code: [src/commands/upgrade.ts](https://github.com/GMOD/jbrowse-components/blob/v2.2.2/products/jbrowse-cli/src/commands/upgrade.ts)_ diff --git a/products/jbrowse-cli/package.json b/products/jbrowse-cli/package.json index 08e6885b02..f4415edfeb 100644 --- a/products/jbrowse-cli/package.json +++ b/products/jbrowse-cli/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/cli", - "version": "2.2.1", + "version": "2.2.2", "description": "A command line tool for working with JBrowse 2", "keywords": [ "jbrowse", diff --git a/products/jbrowse-desktop/package.json b/products/jbrowse-desktop/package.json index 6c197c1278..3f578021fc 100644 --- a/products/jbrowse-desktop/package.json +++ b/products/jbrowse-desktop/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/desktop", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse desktop application specialized to inspect structural variants", "license": "Apache-2.0", "homepage": "./", @@ -45,39 +45,39 @@ "@emotion/react": "^11.9.0", "@fontsource/roboto": "^4.5.0", "@gmod/faidx": "^1.0.1", - "@jbrowse/core": "^2.2.1", - "@jbrowse/plugin-alignments": "^2.2.1", - "@jbrowse/plugin-arc": "^2.2.1", - "@jbrowse/plugin-authentication": "^2.2.1", - "@jbrowse/plugin-bed": "^2.2.1", - "@jbrowse/plugin-breakpoint-split-view": "^2.2.1", - "@jbrowse/plugin-circular-view": "^2.2.1", - "@jbrowse/plugin-comparative-adapters": "^2.2.1", - "@jbrowse/plugin-config": "^2.2.1", - "@jbrowse/plugin-data-management": "^2.2.1", - "@jbrowse/plugin-dotplot-view": "^2.2.1", - "@jbrowse/plugin-gccontent": "^2.2.1", - "@jbrowse/plugin-gff3": "^2.2.1", - "@jbrowse/plugin-grid-bookmark": "^2.2.1", - "@jbrowse/plugin-gtf": "^2.2.1", - "@jbrowse/plugin-hic": "^2.2.1", - "@jbrowse/plugin-jobs-management": "^2.2.1", - "@jbrowse/plugin-legacy-jbrowse": "^2.2.1", - "@jbrowse/plugin-linear-comparative-view": "^2.2.1", - "@jbrowse/plugin-linear-genome-view": "^2.2.1", - "@jbrowse/plugin-lollipop": "^2.2.1", - "@jbrowse/plugin-menus": "^2.2.1", - "@jbrowse/plugin-rdf": "^2.2.1", - "@jbrowse/plugin-sequence": "^2.2.1", - "@jbrowse/plugin-spreadsheet-view": "^2.2.1", - "@jbrowse/plugin-sv-inspector": "^2.2.1", - "@jbrowse/plugin-svg": "^2.2.1", - "@jbrowse/plugin-text-indexing": "^2.2.1", - "@jbrowse/plugin-trackhub-registry": "^2.2.1", - "@jbrowse/plugin-trix": "^2.2.1", - "@jbrowse/plugin-variants": "^2.2.1", - "@jbrowse/plugin-wiggle": "^2.2.1", - "@jbrowse/text-indexing": "^2.2.1", + "@jbrowse/core": "^2.2.2", + "@jbrowse/plugin-alignments": "^2.2.2", + "@jbrowse/plugin-arc": "^2.2.2", + "@jbrowse/plugin-authentication": "^2.2.2", + "@jbrowse/plugin-bed": "^2.2.2", + "@jbrowse/plugin-breakpoint-split-view": "^2.2.2", + "@jbrowse/plugin-circular-view": "^2.2.2", + "@jbrowse/plugin-comparative-adapters": "^2.2.2", + "@jbrowse/plugin-config": "^2.2.2", + "@jbrowse/plugin-data-management": "^2.2.2", + "@jbrowse/plugin-dotplot-view": "^2.2.2", + "@jbrowse/plugin-gccontent": "^2.2.2", + "@jbrowse/plugin-gff3": "^2.2.2", + "@jbrowse/plugin-grid-bookmark": "^2.2.2", + "@jbrowse/plugin-gtf": "^2.2.2", + "@jbrowse/plugin-hic": "^2.2.2", + "@jbrowse/plugin-jobs-management": "^2.2.2", + "@jbrowse/plugin-legacy-jbrowse": "^2.2.2", + "@jbrowse/plugin-linear-comparative-view": "^2.2.2", + "@jbrowse/plugin-linear-genome-view": "^2.2.2", + "@jbrowse/plugin-lollipop": "^2.2.2", + "@jbrowse/plugin-menus": "^2.2.2", + "@jbrowse/plugin-rdf": "^2.2.2", + "@jbrowse/plugin-sequence": "^2.2.2", + "@jbrowse/plugin-spreadsheet-view": "^2.2.2", + "@jbrowse/plugin-sv-inspector": "^2.2.2", + "@jbrowse/plugin-svg": "^2.2.2", + "@jbrowse/plugin-text-indexing": "^2.2.2", + "@jbrowse/plugin-trackhub-registry": "^2.2.2", + "@jbrowse/plugin-trix": "^2.2.2", + "@jbrowse/plugin-variants": "^2.2.2", + "@jbrowse/plugin-wiggle": "^2.2.2", + "@jbrowse/text-indexing": "^2.2.2", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.0.0", "@mui/x-data-grid": "^5.0.1", diff --git a/products/jbrowse-img/package.json b/products/jbrowse-img/package.json index dc8d223331..e58fee4409 100644 --- a/products/jbrowse-img/package.json +++ b/products/jbrowse-img/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/img", - "version": "2.2.1", + "version": "2.2.2", "main": "dist/index.js", "module": "esm/index.js", "author": "JBrowse Team", @@ -29,8 +29,8 @@ "@babel/runtime": "^7.17.9", "@emotion/cache": "^11.7.1", "@emotion/react": "^11.9.0", - "@jbrowse/plugin-linear-genome-view": "^2.2.1", - "@jbrowse/react-linear-genome-view": "^2.2.1", + "@jbrowse/plugin-linear-genome-view": "^2.2.2", + "@jbrowse/react-linear-genome-view": "^2.2.2", "abortcontroller-polyfill": "^1.7.3", "canvas": "^2.9.1", "jsdom": "^19.0.0", diff --git a/products/jbrowse-predefined-sessions/package.json b/products/jbrowse-predefined-sessions/package.json index d6b6c444f7..713ebb43a0 100644 --- a/products/jbrowse-predefined-sessions/package.json +++ b/products/jbrowse-predefined-sessions/package.json @@ -1,6 +1,6 @@ { "name": "jbrowse-predefined-sessions", - "version": "2.2.1", + "version": "2.2.2", "main": "index.js", "author": "JBrowse Team", "license": "MIT", diff --git a/products/jbrowse-react-circular-genome-view/package.json b/products/jbrowse-react-circular-genome-view/package.json index 8fe6e6918a..870dfff99c 100644 --- a/products/jbrowse-react-circular-genome-view/package.json +++ b/products/jbrowse-react-circular-genome-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/react-circular-genome-view", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 circular genome view React component", "keywords": [ "jbrowse", @@ -43,14 +43,14 @@ "@emotion/cache": "^11.7.1", "@emotion/react": "^11.9.0", "@emotion/styled": "^11.8.1", - "@jbrowse/core": "^2.2.1", - "@jbrowse/plugin-authentication": "^2.2.1", - "@jbrowse/plugin-circular-view": "^2.2.1", - "@jbrowse/plugin-config": "^2.2.1", - "@jbrowse/plugin-data-management": "^2.2.1", - "@jbrowse/plugin-sequence": "^2.2.1", - "@jbrowse/plugin-variants": "^2.2.1", - "@jbrowse/plugin-wiggle": "^2.2.1", + "@jbrowse/core": "^2.2.2", + "@jbrowse/plugin-authentication": "^2.2.2", + "@jbrowse/plugin-circular-view": "^2.2.2", + "@jbrowse/plugin-config": "^2.2.2", + "@jbrowse/plugin-data-management": "^2.2.2", + "@jbrowse/plugin-sequence": "^2.2.2", + "@jbrowse/plugin-variants": "^2.2.2", + "@jbrowse/plugin-wiggle": "^2.2.2", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.0.0", "mobx": "^6.6.0", diff --git a/products/jbrowse-react-linear-genome-view/package.json b/products/jbrowse-react-linear-genome-view/package.json index 7109414f98..28eb23b571 100644 --- a/products/jbrowse-react-linear-genome-view/package.json +++ b/products/jbrowse-react-linear-genome-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/react-linear-genome-view", - "version": "2.2.1", + "version": "2.2.2", "description": "JBrowse 2 linear genome view React component", "keywords": [ "jbrowse", @@ -50,22 +50,22 @@ "@emotion/cache": "^11.7.1", "@emotion/react": "^11.9.0", "@emotion/styled": "^11.8.1", - "@jbrowse/core": "^2.2.1", - "@jbrowse/plugin-alignments": "^2.2.1", - "@jbrowse/plugin-authentication": "^2.2.1", - "@jbrowse/plugin-bed": "^2.2.1", - "@jbrowse/plugin-circular-view": "^2.2.1", - "@jbrowse/plugin-config": "^2.2.1", - "@jbrowse/plugin-data-management": "^2.2.1", - "@jbrowse/plugin-gccontent": "^2.2.1", - "@jbrowse/plugin-gff3": "^2.2.1", - "@jbrowse/plugin-legacy-jbrowse": "^2.2.1", - "@jbrowse/plugin-linear-genome-view": "^2.2.1", - "@jbrowse/plugin-sequence": "^2.2.1", - "@jbrowse/plugin-svg": "^2.2.1", - "@jbrowse/plugin-trix": "^2.2.1", - "@jbrowse/plugin-variants": "^2.2.1", - "@jbrowse/plugin-wiggle": "^2.2.1", + "@jbrowse/core": "^2.2.2", + "@jbrowse/plugin-alignments": "^2.2.2", + "@jbrowse/plugin-authentication": "^2.2.2", + "@jbrowse/plugin-bed": "^2.2.2", + "@jbrowse/plugin-circular-view": "^2.2.2", + "@jbrowse/plugin-config": "^2.2.2", + "@jbrowse/plugin-data-management": "^2.2.2", + "@jbrowse/plugin-gccontent": "^2.2.2", + "@jbrowse/plugin-gff3": "^2.2.2", + "@jbrowse/plugin-legacy-jbrowse": "^2.2.2", + "@jbrowse/plugin-linear-genome-view": "^2.2.2", + "@jbrowse/plugin-sequence": "^2.2.2", + "@jbrowse/plugin-svg": "^2.2.2", + "@jbrowse/plugin-trix": "^2.2.2", + "@jbrowse/plugin-variants": "^2.2.2", + "@jbrowse/plugin-wiggle": "^2.2.2", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.0.0", "librpc-web-mod": "^1.1.5", diff --git a/products/jbrowse-web/package.json b/products/jbrowse-web/package.json index 4011627983..4f26e3a39f 100644 --- a/products/jbrowse-web/package.json +++ b/products/jbrowse-web/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/web", - "version": "2.2.1", + "version": "2.2.2", "license": "Apache-2.0", "homepage": ".", "main": "build", @@ -18,36 +18,36 @@ }, "dependencies": { "@fontsource/roboto": "^4.5.0", - "@jbrowse/core": "^2.2.1", - "@jbrowse/plugin-alignments": "^2.2.1", - "@jbrowse/plugin-arc": "^2.2.1", - "@jbrowse/plugin-authentication": "^2.2.1", - "@jbrowse/plugin-bed": "^2.2.1", - "@jbrowse/plugin-breakpoint-split-view": "^2.2.1", - "@jbrowse/plugin-circular-view": "^2.2.1", - "@jbrowse/plugin-comparative-adapters": "^2.2.1", - "@jbrowse/plugin-config": "^2.2.1", - "@jbrowse/plugin-data-management": "^2.2.1", - "@jbrowse/plugin-dotplot-view": "^2.2.1", - "@jbrowse/plugin-gccontent": "^2.2.1", - "@jbrowse/plugin-gff3": "^2.2.1", - "@jbrowse/plugin-grid-bookmark": "^2.2.1", - "@jbrowse/plugin-gtf": "^2.2.1", - "@jbrowse/plugin-hic": "^2.2.1", - "@jbrowse/plugin-legacy-jbrowse": "^2.2.1", - "@jbrowse/plugin-linear-comparative-view": "^2.2.1", - "@jbrowse/plugin-linear-genome-view": "^2.2.1", - "@jbrowse/plugin-lollipop": "^2.2.1", - "@jbrowse/plugin-menus": "^2.2.1", - "@jbrowse/plugin-rdf": "^2.2.1", - "@jbrowse/plugin-sequence": "^2.2.1", - "@jbrowse/plugin-spreadsheet-view": "^2.2.1", - "@jbrowse/plugin-sv-inspector": "^2.2.1", - "@jbrowse/plugin-svg": "^2.2.1", - "@jbrowse/plugin-trackhub-registry": "^2.2.1", - "@jbrowse/plugin-trix": "^2.2.1", - "@jbrowse/plugin-variants": "^2.2.1", - "@jbrowse/plugin-wiggle": "^2.2.1", + "@jbrowse/core": "^2.2.2", + "@jbrowse/plugin-alignments": "^2.2.2", + "@jbrowse/plugin-arc": "^2.2.2", + "@jbrowse/plugin-authentication": "^2.2.2", + "@jbrowse/plugin-bed": "^2.2.2", + "@jbrowse/plugin-breakpoint-split-view": "^2.2.2", + "@jbrowse/plugin-circular-view": "^2.2.2", + "@jbrowse/plugin-comparative-adapters": "^2.2.2", + "@jbrowse/plugin-config": "^2.2.2", + "@jbrowse/plugin-data-management": "^2.2.2", + "@jbrowse/plugin-dotplot-view": "^2.2.2", + "@jbrowse/plugin-gccontent": "^2.2.2", + "@jbrowse/plugin-gff3": "^2.2.2", + "@jbrowse/plugin-grid-bookmark": "^2.2.2", + "@jbrowse/plugin-gtf": "^2.2.2", + "@jbrowse/plugin-hic": "^2.2.2", + "@jbrowse/plugin-legacy-jbrowse": "^2.2.2", + "@jbrowse/plugin-linear-comparative-view": "^2.2.2", + "@jbrowse/plugin-linear-genome-view": "^2.2.2", + "@jbrowse/plugin-lollipop": "^2.2.2", + "@jbrowse/plugin-menus": "^2.2.2", + "@jbrowse/plugin-rdf": "^2.2.2", + "@jbrowse/plugin-sequence": "^2.2.2", + "@jbrowse/plugin-spreadsheet-view": "^2.2.2", + "@jbrowse/plugin-sv-inspector": "^2.2.2", + "@jbrowse/plugin-svg": "^2.2.2", + "@jbrowse/plugin-trackhub-registry": "^2.2.2", + "@jbrowse/plugin-trix": "^2.2.2", + "@jbrowse/plugin-variants": "^2.2.2", + "@jbrowse/plugin-wiggle": "^2.2.2", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.0.0", "@mui/x-data-grid": "^5.0.1",