From b031decd8d3ee2000cf32b5ef486d026bb3b1b7e Mon Sep 17 00:00:00 2001
From: Colin <colin.diesh@gmail.com>
Date: Fri, 14 Oct 2022 00:39:35 -0600
Subject: [PATCH] Restore display of derived_features

---
 plugins/gff3/src/Gff3Adapter/Gff3Adapter.ts                   | 2 +-
 .../src/Gff3Adapter/__snapshots__/Gff3Adapter.test.ts.snap    | 4 ++++
 plugins/gff3/src/Gff3TabixAdapter/Gff3TabixAdapter.ts         | 3 ++-
 .../__snapshots__/Gff3TabixAdapter.test.ts.snap               | 4 ++++
 products/jbrowse-desktop/craco.config.js                      | 1 +
 5 files changed, 12 insertions(+), 2 deletions(-)

diff --git a/plugins/gff3/src/Gff3Adapter/Gff3Adapter.ts b/plugins/gff3/src/Gff3Adapter/Gff3Adapter.ts
index b35bb7eb6a..cf8d263745 100644
--- a/plugins/gff3/src/Gff3Adapter/Gff3Adapter.ts
+++ b/plugins/gff3/src/Gff3Adapter/Gff3Adapter.ts
@@ -158,7 +158,7 @@ export default class extends BaseFeatureDataAdapter {
 
     delete f.child_features
     delete f.data
-    delete f.derived_features
+    // delete f.derived_features
     delete f.attributes
     delete f.seq_id
     return f
diff --git a/plugins/gff3/src/Gff3Adapter/__snapshots__/Gff3Adapter.test.ts.snap b/plugins/gff3/src/Gff3Adapter/__snapshots__/Gff3Adapter.test.ts.snap
index d2e143697b..649eee250d 100644
--- a/plugins/gff3/src/Gff3Adapter/__snapshots__/Gff3Adapter.test.ts.snap
+++ b/plugins/gff3/src/Gff3Adapter/__snapshots__/Gff3Adapter.test.ts.snap
@@ -3,6 +3,7 @@
 exports[`adapter can fetch features from volvox.gff3 test getfeatures on gff plain text adapter 1`] = `
 Array [
   Object {
+    "derived_features": Array [],
     "end": 6079,
     "name": "ctgB",
     "phase": 0,
@@ -14,6 +15,7 @@ Array [
     "uniqueId": "test-offset-187",
   },
   Object {
+    "derived_features": Array [],
     "end": 1984,
     "name": "f07",
     "note": "This is an example",
@@ -26,6 +28,7 @@ Array [
     "uniqueId": "test-offset-188",
   },
   Object {
+    "derived_features": Array [],
     "end": 6130,
     "name": "f06",
     "note": "This is another example",
@@ -38,6 +41,7 @@ Array [
     "uniqueId": "test-offset-189",
   },
   Object {
+    "derived_features": Array [],
     "end": 5968,
     "name": "f05",
     "note": "ああ、この機能は、世界中を旅しています！",
diff --git a/plugins/gff3/src/Gff3TabixAdapter/Gff3TabixAdapter.ts b/plugins/gff3/src/Gff3TabixAdapter/Gff3TabixAdapter.ts
index 597ab1dc96..cc8a5b162b 100644
--- a/plugins/gff3/src/Gff3TabixAdapter/Gff3TabixAdapter.ts
+++ b/plugins/gff3/src/Gff3TabixAdapter/Gff3TabixAdapter.ts
@@ -247,10 +247,11 @@ export default class extends BaseFeatureDataAdapter {
 
     delete f.child_features
     delete f.data
-    delete f.derived_features
+    // delete f.derived_features
     delete f._linehash
     delete f.attributes
     delete f.seq_id
+
     return f
   }
 
diff --git a/plugins/gff3/src/Gff3TabixAdapter/__snapshots__/Gff3TabixAdapter.test.ts.snap b/plugins/gff3/src/Gff3TabixAdapter/__snapshots__/Gff3TabixAdapter.test.ts.snap
index f9e7a69945..4024ebd14b 100644
--- a/plugins/gff3/src/Gff3TabixAdapter/__snapshots__/Gff3TabixAdapter.test.ts.snap
+++ b/plugins/gff3/src/Gff3TabixAdapter/__snapshots__/Gff3TabixAdapter.test.ts.snap
@@ -3,6 +3,7 @@
 exports[`adapter can fetch features from volvox.gff3 test getfeatures on gff plain text adapter 1`] = `
 Array [
   Object {
+    "derived_features": Array [],
     "end": 6079,
     "name": "ctgB",
     "phase": 0,
@@ -14,6 +15,7 @@ Array [
     "uniqueId": "test-offset-794327",
   },
   Object {
+    "derived_features": Array [],
     "end": 1984,
     "name": "f07",
     "note": "This is an example",
@@ -26,6 +28,7 @@ Array [
     "uniqueId": "test-offset-794370",
   },
   Object {
+    "derived_features": Array [],
     "end": 6130,
     "name": "f06",
     "note": "This is another example",
@@ -38,6 +41,7 @@ Array [
     "uniqueId": "test-offset-794439",
   },
   Object {
+    "derived_features": Array [],
     "end": 5968,
     "name": "f05",
     "note": "ああ、この機能は、世界中を旅しています！",
diff --git a/products/jbrowse-desktop/craco.config.js b/products/jbrowse-desktop/craco.config.js
index fa0260a5ac..19cc6f05cd 100644
--- a/products/jbrowse-desktop/craco.config.js
+++ b/products/jbrowse-desktop/craco.config.js
@@ -53,6 +53,7 @@ module.exports = {
       // worker chunks xref
       // https://github.com/webpack/webpack/issues/13791#issuecomment-897579223
       config.output.publicPath = 'auto'
+      config.cache = false
       return config
     },
   },